Pseudomonas chloritidismutans AW-1, F753_18015
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chloritidismutans AW-1 Scaffold_60_Contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCCTTGGTCTGCCCGGCCCACGCCATCCCAAGCAGGCCTTCGATGTCATGGTTGCTGCGGCGCGCAAGCTGTCCCAGGAGCTCAACGGCGAGCTGAAGGA TGACCAGCGCAGCGTTCTCACCGCCCAGACCATCGAGCACTACCGCCAGCGCATCGTCGAGTTCGAGCGCCGGCAGATGACCATCAAGCAGCGTTGAGTG ATATTTGCACCGGGCCTTGCGCCCGGTGTTGTGTGTTAGCAGACGTGGCTTGCTCGCGCCGTCTCATGCTCCTGTCTCCAGTGCAGGCATTCCATTGACG GGCGCGCTCCGCCTCTGTCCATCAGTGAGCAGTTTGATTCGGGATGGCTGAGGCCGTCCCGCTGCACTTCCAGCCTCCGACTAGCCAAAGCCGCGAACCT GCCTTCGATTGCGCATTCGGCTAGAATCCGACGCCTCACTATCAACCAAGGCGCGCTGATACGGTCTGAATCAGCACAGCCCCAGCCACGGCTCCGTCTT
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| DNA Sequence for Gene |
>F753_18015
ATGCCTTCCGCCCAAACTGCCGCCGAGCGCATCGCCGAACTGCGCGGCGAAATCGACGCCCACAACTATCGCTACTACGTGCTCGACGAGCCGAGCGTTC CTGACGCCGAGTACGACCGCCTGTTTAACGAGCTCAAGGCGCTCGAAGCAGAGCACCCGGAACTGGTAACGCCCGAGTCGCCAACCCAGCGGGTTGGAGG AGCGGCGCTCGCGGCATTCGGTCAGGTGCGCCACGAAGTGCCGATGCTGAGTCTGGGCAATGCCTTCGAGGAGCAGGATCTGCTCGATTTCGACCGCCGC GTGCGCGAAGGGCTGGATCTGCCGGCGGGCGACCTGTTCGGCGATGACGCTGTGGTCGAGTACAGCTGCGAACCCAAACTGGATGGTCTGGCGGTCAGCC TGCTTTATGAGAACGGCCATCTGGTGCGCGGCGCCACCCGGGGCGATGGCAGCACGGGTGAGGACATCAGCGCCAACGTGCGCACCGTACGCAACATTCC ATTGAAGCTGCATGGCAGTGGCTGGCCTGCGGTACTCGAGGTGCGCGGCGAGATCTACATGCCGAAGGCCGGCTTCGAAGCGCTCAACGCGCGACAGCTG GAAAGCGGCGGCAAACCCTTCGCCAATCCTCGCAACGCCGCTGCTGGAAGCCTGCGTCAGTTGGATTCGAAGATCACTGCCAGCCGTCCGCTCGAACTTT GTGCCTACGGCGTAGGGCGCAGCGATGGCGAGCTGCCGGGTACGCACATCGGGATTCTCGAGGCGCTGAAAAGCTGGGGCCTGCCCATCAGTCGAGAGCT GAAACTGGCCAAGGGCGTCGCCGAATGCCGCGCCTATTACGACGCCATCGGTGAAAAGCGCGACGCGCTGCCTTACGAAATCGACGGTGTGGTGTTCAAG GTCAACGCGGTCGCGCAGCAGCGTGAGCTGGGCTTCCGGGCGCGCGAGCCGCGCTGGGCCATCGCCCACAAGTTTCCCGCGCGGGAGGAAATCACCGAAC TGCTCGATGTGGAATTCCAGGTCGGCCGCACCGGTGCGATCACCCCGGTCGCACGGCTAAAGCCCGTGCAGGTGGCGGGCGTTACGGTGTCCAACGCGAC GCTGCACAACATGGATGAAGTGGCGCGGCTTGGCGTGATGATCGGCGATACGGTGATCGTGCGACGTGCGGGCGACGTGATTCCCCAGATCCTCGGCGTA ATCGCCGAACGCCGCCCGGCCGACGCGCGCGCCGTGCATGTGCCGGAGCAGTGCCCGGTGTGCGGTTCTGCCGTGGAGCGTACCCAGCTGATCAAGCGCA GCAAGGGGCGTGAGTCGGTGAGCGAAGGCTCGATCTACCGTTGCGTCGGCCGTCTGGCGTGCCAGGCTCAGCTTAAGCAGGCGATCATCCATTTCGTATC GCGCCGAGCGATGGATATCGACGGCCTGGGCGACAAGCTCGTCGAGCAGCTGGTCGACAGGGGGTTGGTCAAATCGCCGGCGGATCTCTACTGCCTGACC CATGAGCAGGTCATTGAGCTGGAGGGGTTCGCCGAGATTTCCACGCGCAACTTGCTTAACGCCGTCGACGCCAGCCGCAAACCAAGCCTTGCGCGTTTCG TCTACGCCCTTGGCATACCCGATGTCGGCGAGGAAACCGCCAAGTTGTTGGCACGAGCGCTGGGCTCCTTGGATCGCATAGGTCGCGCGCTGCCTGATGT GCTTGTTTACCTGCCCGATGTCGGCCTGGAAGTCGCTCATGAGATCCACAGCTTCTTCGAGGACGAACACAACCGCACGGTCATCGCGCTGCTGCGCGAA CGCGGCGTCGAACCACAGGAGGAGGGCGCCCTTCACCCTGAATTCGCCGCCTGCGCGACGCTGGCGGACCTGCTCGACCGGCTCAACATCCCCTATATCG CCCGCACCGGCGCCCAGCGCCTGGCAGAACGTTTCGGCAGCCTGGACGCGATCATCGCCGCCGACTGGCTCGATCTGCGCCAGGTTGAACGCCTTACCGA AAAGGCCGCACGCTCGCTGCGCGATTACTTCGACAAACCTGAAAACACCGAACGCGCCCGCGCTATCGAATCGCAGTTGCGGGAATTCGGTATGCATTGG GAGAGCGAACGGAAGTCCGCGGAAGGTCTGCCGCTGGCCGGGCAGACCTGGGTGCTGACCGGCACGCTCGAAGCAATGAGCCGCGACGAAGGCAAGACGC GGCTGGAGGCGTTGGGGGCCAAGGTTGCCGGTTCCGTGTCGGCCAAGACGTCCTGTGTGGTGGCGGGGCCCGGCGCGGGTTCGAAGCTCACCAAAGCCAA CGAACTCGGCGTGGCGGTGCTCGACGAAGCGCAATTCCTCGAGCGCCTCGCACAGCTTGGTTCATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CACGTCAGCAACGCCTCATCCCAGTGAGCTTCGCTGTCATACCCGCTCCCCAAATGTTTCACCGAATCTGTGGGAGCGGCCTTGGCCGGGACGCGCCAGC AAAGCTCACCAGCAGTGAGCGAGCCCCTTTGACCCCAGGTCAGGGAAACGGCTTCAGCTATCCCCCCCTAAAGTTTTCCCCGCCTCACCCGAAAAGCTAG TCAAGCAAGTCCGCAGTATGGATGCGCTGGCGTAGCGTTGGAGCGGTACCGGGCTCACGAAAAAGTTCGAATTTGCCCTAAAGCCAACCCAAACGGCGCC GATAAAAGGAACGAATGCGAACTCGATGGGTGCCTGGGCACAAGCCGGCCCGGAGTCGCAAGCTCAGGCAACCAAAGTAACTAGCGCCCTTGGAGGCAAA CACCATGGCTCTTACCGTCAATACCAATATTGCTTCGCTGAATACTCAGCGTAACCTGCAGTCCTCTTCCAATGCGTTGCAGACTTCCATGCAGCGCCTG
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| Amino Acid Sequence |
>NAD-dependent DNA ligase LigA
MPSAQTAAERIAELRGEIDAHNYRYYVLDEPSVPDAEYDRLFNELKALEAEHPELVTPESPTQRVGGAALAAFGQVRHEVPMLSLGNAFEEQDLLDFDRR VREGLDLPAGDLFGDDAVVEYSCEPKLDGLAVSLLYENGHLVRGATRGDGSTGEDISANVRTVRNIPLKLHGSGWPAVLEVRGEIYMPKAGFEALNARQL ESGGKPFANPRNAAAGSLRQLDSKITASRPLELCAYGVGRSDGELPGTHIGILEALKSWGLPISRELKLAKGVAECRAYYDAIGEKRDALPYEIDGVVFK VNAVAQQRELGFRAREPRWAIAHKFPAREEITELLDVEFQVGRTGAITPVARLKPVQVAGVTVSNATLHNMDEVARLGVMIGDTVIVRRAGDVIPQILGV IAERRPADARAVHVPEQCPVCGSAVERTQLIKRSKGRESVSEGSIYRCVGRLACQAQLKQAIIHFVSRRAMDIDGLGDKLVEQLVDRGLVKSPADLYCLT HEQVIELEGFAEISTRNLLNAVDASRKPSLARFVYALGIPDVGEETAKLLARALGSLDRIGRALPDVLVYLPDVGLEVAHEIHSFFEDEHNRTVIALLRE RGVEPQEEGALHPEFAACATLADLLDRLNIPYIARTGAQRLAERFGSLDAIIAADWLDLRQVERLTEKAARSLRDYFDKPENTERARAIESQLREFGMHW ESERKSAEGLPLAGQTWVLTGTLEAMSRDEGKTRLEALGAKVAGSVSAKTSCVVAGPGAGSKLTKANELGVAVLDEAQFLERLAQLGS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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