Strain | Pseudomonas chloritidismutans AW-1 Scaffold_57_Contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CTTGCGCATGAGGATCACGTCCAGATCAGTCAGGGCCGCATCGACCTCCCCATCCTTCTCGAACCAATGTTGTGGGTCGTTGAATACCCGCAGCGGGCAC ATGCGCGCCCGGGCCTGATTGCCGAGCTGATATAGATCGCGCTGCTCCATGTAGAACAGTGTCCAGCCTCGCGCCTGGGCAGCCAGCAGCATGGCCAGCG AGCTGTCCTTCTTGAAGGCGATCTGCGCGATAGGGTCCATGATGATCCCGACGCGAACGGTCATGGGGTGTTCTCCGGCAATGGGCGGCGAAGCGCCGCC AGTGGCTCAAAATGTCGCTGCAGATTGGCTGTGGTTGTGCACTGGGTCAAGGAAAATCCGGATGCTTTTCCGGTTGATAGCGTGTGCATGAGGAGTGTGC TAAAAAGGTCCGGCGATTGGGTGCAGCCCATCGGTGGCAGGGCCTCCGGCGCACTGACATAACGATAAACTACGACTCACCGAGGCGATGGTAGGGCGAA
|
|
DNA Sequence for Gene |
>F753_16400
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCTGAAGAAAGTAGGTTGCGATG TCATCACCGCTGTGGACGGTTTCGATGCGCTCGCCAAGATTGCGGATACTCATCCCCGCATCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTA TCAGACCTGTGCGTTGATCAAGAACAACAGTTCCTTCAAGTCGACGCCGGTGATCATGCTGTCTTCCAAAGATGGCCTGTTCGACAAGGCCAAAGGGCGT ATTGTCGGATCCGATCAATACCTTACCAAGCCGTTCAGCAAAGAAGAGCTGCTCGGTGCGATCAAGGCGCACGTCCCTGATTTCGCACCGGTGGAGCAAG CATCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
AGTTCGGCATTGTTTGCCGCTGAAGCCTTCCTATGGAGAAATCATGGCTCGCGTTCTGATTGTTGATGATTCGCCGACCGAAATGTACAAGCTCACCGCC ATGCTTGAGAAGAATGGCCATGTGGTGCTTAAAGCAGAGAATGGCGCTGACGGCGTCGCGCTGGCTCGTCAGGAAAAGCCGGATGCCGTGTTGATGGATA TTGTCATGCCCGGGCTGAATGGTTTTCAGGCTACGCGCCAACTGACCAAAGATTCTGAAACCAGTCACATTCCGGTGATCATCGTCACCACCAAGGATCA GGAAACCGATAAGGTCTGGGGCAAACGCCAAGGCGCCAAGGATTACCTGACCAAGCCGGTGGACGAAGCCACATTGCTGAAGACCCTGAATGCCGTTCTG GCGGGCTGACGCCGCGGTAGCCAACACTCGGACAAAGGGACGTGGCCAGCATGCCTGACATGCAAACGCCGTTTCAGCAGTTGCTGGAGCTAGATAAACG
|
|
Amino Acid Sequence |
>pilus response regulator PilG
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFKSTPVIMLSSKDGLFDKAKGR IVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|