Pseudomonas chloritidismutans AW-1, F753_12825
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chloritidismutans AW-1 Scaffold_43_Contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCACCCACAATCCGCACACATGTTATCCACAGGTTATCCCAGGCGGCTGCCTTGCATTGGCCCGGAGCCAGCATTATCTTGTCGCTCCTGCGCGCCTTGA CCCCTAGATATTGGGCCTGGGCACCGCAACTGACACAATCGAGACATTTTCGAGAGCTGGGCTATCGCCCTGCCTCCCATTGCTCTGCAACACCGTCGGC AGCCTCAGGTCAAGCATTAATGCAAGCCTTCGACAGTCGTCTCCCTGACTTCAAGCGCGGAACTAGCAGCTGTGCTCGGAGCCAAGACAAAACACAACAT ATTGTGTTGACAGTTTTTCCAGCCTGACTATCCTTCCGGCAACGACTTAGCTCGTCAGCGGCCGAGTCAGGACTATTCCTTGCGATACCGCCATGCACCG CGATGCGGGGCATGGCTCATGCAGTAACGACGCACGGGCTCAACGAGGCCCGCGCAGACAGAACCAGAACCGCGACTAAAAGAGAGAATCCGGAGCCCCC
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| DNA Sequence for Gene |
>F753_12825
ATGCAGAACCCATCCACTCGCGAGAACCCGCTGTCAGCCGATGCACCGGATCTGGCGGCTACCGCCCCGGGCCAGCTGCGCGTGATCAAGCGCAACGGTA CGGTCGTCCCCTACACCGACGACAAGATCACCGTCGCCATCACCAAGGCCTTTCTCGCAGTGGAAGGCGGTAACGCTGCCGCTTCCTCGCGTATTCACGA CACCGTCGCGCGCCTGACCGAGCAGGTCAGCGCCACCTTCCGTCGTCGCATGCCCTCCGGTGGCACCATCCATATCGAAGAAATTCAGGACCAGGTCGAA CTGGCCCTGATGCGTGCCGGTGAGCAGAAAGTCGCGCGTGACTACGTGATCTACCGCGAAGCCCGTAGCCAGGAGCGCAAGAGCGCCGCGGCCAACGACA TCGCCCAGCCGCACCCGAGCATCCGCGTCACCCGCGCCGATGGCAGCCAGCAGCCGCTGGACATGGGTCGCCTGCAGACCATCATCACCGAAGCCTGCGA AGGCCTGGCCGAGGTCGATGGCGCGCTGATCGAGCGTGAAACCCTGAAGAACCTCTACGACGGCGTGGCCGAGAAGGACGTCAACACCGCCCTGGTGATG ACTGCCCGTACCCTGGTCGAGCGTGAGCCGAACTACAGCCAGGTCACCGCGCGCCTGCTGATGGACACCCTGCGTGCCGAAGCCCTGGGCTTCCTCGGCG TTGCCGAAGCCGCCACCCATCACGAGATGGCCGACCTCTACGCCAAGGCCCTGCCGGCCTACATCGAGAAAGGCGTCGAGTTCGAACTGCTCGACTCCAA GCTCAAGAGCTACGACCTGGCCAAGCTGGGCGCCGCGCTCAACCACGAGCGTGACCAGCAGTTCACCTACCTCGGCCTGCAGACCCTGTACGACCGCTAC TTCATCCACAAGGACAACGTTCGCTTCGAGCTGCCGCAGATCTTCTTCATGCGCGTCGCCATGGGCCTGGCCATCGAGGAAGAGCAGAAAGAAACCCGCG CCATCGAGTTCTACAACCTGTTGTCGTCCTTCGACTACATGGCCTCGACGCCGACCCTGTTCAACGCCGGCACCCTGCGTCCGCAGCTGTCCTCGTGCTA CCTGACCACCGTGCCGGACGACCTGGGCGGCATCTACGACGCCATCCGCGATAACGCCCTGCTCTCCAAGTTCGCCGGCGGCCTGGGCAACGACTGGACC CCGGTACGCGCACTGGGCGCCTACATCAAGGGCACCAACGGCAAATCCCAGGGCGTCGTGCCCTTCCTGAAAGTGGTCAACGACACCGCCGTCGCGGTCA ACCAGGGCGGCAAGCGCAAGGGCGCGGTCTGCGCGTACCTGGAAACCTGGCACCTGGACATCGAGGAATTCCTCGAGCTGCGCAAGAACACCGGTGACGA CCGTCGCCGTACCCACGACATGAACACCGCCAACTGGATTCCGGACCTGTTCATGAAGCGCGTCTTCGACGACGGCCCCTGGACCCTGTTCTCCCCGTCC GACGTCCCCGACCTGCACGACCTCACCGGCCGCGCCTTCGAGGAGCGTTACGAGTACTACGAGGAGCTGACCAAGTACGGCAAGATCAAGCTGTTCAAGA CCCTGCCGGCCAAGGACCTGTGGCGCAAGATGCTCTCGATGCTGTTCGAGACCGGCCACCCGTGGCTGACCTTCAAGGACCCGTGCAACCTGCGCAGCCC GCAGCAGCACGTCGGCGTGGTGCACAGCTCCAACCTGTGCACCGAGATCACCCTGAACACCAACAAGGACGAGATCGCCGTCTGCAACCTGGGCTCGATC AACCTGGTCAACCACATCAAGGACGGCAAGCTCGACGCCGCCAAGCTGGAGCGCACCGTGCGCACCGCTGTGCGCATGCTCGATAACGTCATCGACATCA ACTACTACAGCGTGCCGCAGGCGCAGAACGCCAACTTCAAGCACCGTCCGGTGGGCCTGGGCATCATGGGCTTCCAGGACGCGCTGTACCTGCAGCACAT CGCCTACGGTTCCGACGCCGCCATCGACTTCGCCGACAAGTCCATGGAAGCCATCAGCTACTTCGCCATCCAGGCTTCCTGTGACCTGGCCGACGAGCGC GGCGCCTACTCCAGCTTCCAGGGCTCGCTGTGGTCCCAGGGCATCCTGCCGCTGGATTCCCAGCAGATCCTCATCGAGGCCCGTGGCCAGAAGTACATCG ACGTCGACCTGACCGAATCCCTGGATTGGGCGCCGATCCGCGAACGCGTCAAGAAAGGCATTCGCAACTCGAACATCATGGCCATCGCCCCGACCGCGAC CATCTCCAACATCGTTGGCGTGTCGCAGTCCATCGAGCCGACGTACCAGAACCTGTACGTCAAATCGAACCTGTCCGGCGAGTTCACCGTGATCAACCCG TACCTGGTCCACGACCTCAAGGCCCGCGGCCTGTGGGACCCGGTCATGGTCAACGACCTCAAGTACTACGACGGTTCCGTACAGCAGATCGAGCGCATCC CGCAGGATCTGAAGGACATGTACGCCACCGCCTTCGAAGTGGAAACCAAGTGGATCGTCGACGCCGCCAGCCGCCGCCAGAAGTGGATCGACCAGGCGCA GTCGCTGAACCTTTACATCGCCGGCGCCTCGGGCAAGAAGCTCGACGTGACCTACCGCATGGCCTGGTACCGTGGCCTGAAAACCACCTACTACCTCCGT GCCCTGGCCGCGACCAGCACCGAGAAGTCCACCATCAACACCGGCAAGCTGAACGCCGTGTCCAGTGGTGGCAGCGAGGCGGCGAACTCCGCCAGCGCCG CTCCGGCTGCTGCAGAGCCGCAGCCGGCTCCGGTGCCGCTGGCGTGTTCGATCGATAACCCCGACTGCGAAGCCTGCCAATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTTCAAAGTCGCGGCCCCCAGAGCGGTCCGCGCGTTGTTGCCCGCCAGCCCGGCCCCCATCACGTACATGCGTACGCTCAGGGGCTCCGGACTGACGGGC GCCTAGCGCGACCTCGCTCTGGAACCCGCTCACACCGAGCGGTTTTTTAAGAACGAAGCGAACGGCCCGTTCTCGCTTGCCAGGTACTTACAACCAACGC AGTGGCTACCGATCGAACAAGCCAGACGCCAACACCAAACCAGTCCCCTCGCCCCTCTGGGGAGAGGGCTAGGGTGAGGGGCAACCCTCCAGACAAACAC AAGCGGTCGGACCAGACACCTGACCGTCCCCTCGCCCCTCCGGGGAGAGGGTCAGGGTGAGGGGCAGCCCCACCAGACGATGCAAAAGGCCGGACCTATC TCGGCCCAAACCAAATACCCGCTTTTGCGTGCAAACCAAAAGCACCCAAACACATCCGACCGGCCAAGCCCCGGTCCCCGATCAGGAGCTATCGCACATG
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit alpha
MQNPSTRENPLSADAPDLAATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGNAAASSRIHDTVARLTEQVSATFRRRMPSGGTIHIEEIQDQVE LALMRAGEQKVARDYVIYREARSQERKSAAANDIAQPHPSIRVTRADGSQQPLDMGRLQTIITEACEGLAEVDGALIERETLKNLYDGVAEKDVNTALVM TARTLVEREPNYSQVTARLLMDTLRAEALGFLGVAEAATHHEMADLYAKALPAYIEKGVEFELLDSKLKSYDLAKLGAALNHERDQQFTYLGLQTLYDRY FIHKDNVRFELPQIFFMRVAMGLAIEEEQKETRAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLGGIYDAIRDNALLSKFAGGLGNDWT PVRALGAYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGPWTLFSPS DVPDLHDLTGRAFEERYEYYEELTKYGKIKLFKTLPAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSI NLVNHIKDGKLDAAKLERTVRTAVRMLDNVIDINYYSVPQAQNANFKHRPVGLGIMGFQDALYLQHIAYGSDAAIDFADKSMEAISYFAIQASCDLADER GAYSSFQGSLWSQGILPLDSQQILIEARGQKYIDVDLTESLDWAPIRERVKKGIRNSNIMAIAPTATISNIVGVSQSIEPTYQNLYVKSNLSGEFTVINP YLVHDLKARGLWDPVMVNDLKYYDGSVQQIERIPQDLKDMYATAFEVETKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKTTYYLR ALAATSTEKSTINTGKLNAVSSGGSEAANSASAAPAAAEPQPAPVPLACSIDNPDCEACQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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