Pseudomonas chloritidismutans AW-1, F753_12820
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chloritidismutans AW-1 Scaffold_43_Contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TAACTTCAAAGTCGCGGCCCCCAGAGCGGTCCGCGCGTTGTTGCCCGCCAGCCCGGCCCCCATCACGTACATGCGTACGCTCAGGGGCTCCGGACTGACG GGCGCCTAGCGCGACCTCGCTCTGGAACCCGCTCACACCGAGCGGTTTTTTAAGAACGAAGCGAACGGCCCGTTCTCGCTTGCCAGGTACTTACAACCAA CGCAGTGGCTACCGATCGAACAAGCCAGACGCCAACACCAAACCAGTCCCCTCGCCCCTCTGGGGAGAGGGCTAGGGTGAGGGGCAACCCTCCAGACAAA CACAAGCGGTCGGACCAGACACCTGACCGTCCCCTCGCCCCTCCGGGGAGAGGGTCAGGGTGAGGGGCAGCCCCACCAGACGATGCAAAAGGCCGGACCT ATCTCGGCCCAAACCAAATACCCGCTTTTGCGTGCAAACCAAAAGCACCCAAACACATCCGACCGGCCAAGCCCCGGTCCCCGATCAGGAGCTATCGCAC
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| DNA Sequence for Gene |
>F753_12820
ATGCTGAGCTGGGACGAATTCAACGAAGAAGACACCACCACCGCCGCGCCGGCCCCCGCTGCCGCGCAGCCGGCAGGCCAGACCGCAGCCAAGCTGGACA ACGACGCCGCCGGCTCCGTGGAAGAAGCCCGCGCCGTTGCCGCCAGTGACTCCGACGCCATCGCCCGCGCCAAGCGCGCGCTGGACGACCTGGACATCCA GGAAGGTCTCAACGAACTGGAAGGCGAATCGGCCCGCGTACGCGTCGACGAGAAGCGTATGATCAACGCCCGCGCCGACCTCAACCAGCTCGTACCCTTC AAGTACGACTGGGCCTGGCAGAAGTATCTGGATGGTTGCGCCAACCACTGGATGCCGCAGGAAGTGAACATGAACGCCGACATTGCCCTGTGGAAGAGCA AGGACGGCCTCAGCGAAGACGAGCGCCGCATCGTCAAGCGCAACCTCGGCTTCTTCTCCACCGCCGACAGCCTGGTCGCCAACAACCTCGTACTGGCCAC CTACCGCCTGATCACCAACCCCGAGTGCCGCCAGTACATCCTGCGCCAGGCCTTCGAAGAGGCGATCCACACCCACGCCTACCAGTACTGCATCGAATCG CTGGGCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATCCCGAGCGTCGCGAAAAAGGCCAGCTGGGGCCTCAAGTACACCCGCTCCATCTCCG ACCCGACTTTCCAGACCGGCACCCCGGAGACCGACAAGCAGTTCCTGCGCAACCTCATCGCCTACTACTGCGTACTCGAAGGCATCTTCTTCTATTGCGG CTTCACCCAGATCCTCTCCATGGGCCGCCGCAACAAGATGACCGGCACCGCCGAGCAGTTCCAGTACATCCTGCGCGACGAGTCCATGCACCTAAACTTC GGCATAGACATGATCAACCAGATCAAGATCGAGAACCCGCACCTGTGGGACGCCGACATGAAGGACGAAGCAACCCAGATGATCCTCCAGGGCACCCAAC TGGAAATCGAATACGCGCGCGACACCATGCCCCGTGGCGTCCTCGGCATGAACGCCGCAATGATGGAGGACTACCTCAAGTTCATCGCCAACCGTCGTCT GACGCAGATCGGCTTGAAGGAAGAGTATCCAGGCACTACCAACCCGTTCCCATGGATGAGCGAGATCATGGACCTGAAGAAGGAGAAGAACTTCTTTGAG ACGCGGGTTATTGAATATCAGACTGGTGGGGCGTTGAGTTGGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCCTGGGTCTGGACCGTTAGGACACATTACAAGCGCTTTACCTGATTACGGATGTCCGGGGTAGCGAGAAACACTAAAAGCCCCGCCTAGTGCGGGGCT TTCTATAAGGATTCTAAAATGTCGAATAAAGAAAAAAATCAGAACCAAGAAAAAGTCGTTAAACGCGAAATTGTTTGGAAAAAAGAAAATCCAACAAACG TCCAGGTAAACAACGACAATGGAAAAACCACTAGCACAGGCCCTCGCACGCCCACTAAAAACAAAAATCAAGAATGAAACTATCAGACTATAAAAGCTCT TACTACGACCACACTGCAAGCGCAAGCAGCGTAGCCCGACAAATAGCATTCGCCGGAATAGCTTTTATATGGATATTTAAAAGAGAATCTACAGGCTCTA TCACTTTACCTACAGAGCTACTGTGGCCAGCAATCCTATTAATTCTTGGCCTCACATCAGACCTACTCCAATACTTCTCCGCCTCAGCAATCTGGGGCGT
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFNEEDTTTAAPAPAAAQPAGQTAAKLDNDAAGSVEEARAVAASDSDAIARAKRALDDLDIQEGLNELEGESARVRVDEKRMINARADLNQLVPF KYDWAWQKYLDGCANHWMPQEVNMNADIALWKSKDGLSEDERRIVKRNLGFFSTADSLVANNLVLATYRLITNPECRQYILRQAFEEAIHTHAYQYCIES LGMDEGEIFNMYHEIPSVAKKASWGLKYTRSISDPTFQTGTPETDKQFLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGTAEQFQYILRDESMHLNF GIDMINQIKIENPHLWDADMKDEATQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLTQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFFE TRVIEYQTGGALSWD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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