Pseudomonas chloritidismutans AW-1, F753_12330
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chloritidismutans AW-1 Scaffold_40_Contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TGCACCGACCTCCGAAGAGGTGTCAGCCGATGTGGTCGATGACGATACCCGTGCCAGGGCGCTTTCGTGTCGCGTGCTCATCGTCGACGACTCGTCTGTG GCGCGTAAGCAGATTGCTCGTTGCCTGGAAAATATCGGTATCGAGGTCGTCAAGCTGAATGATGGACGGGAGGCTCTCAATTATCTGAAGCGAATGGCTG ACGAGGGCAAGAAACCGGCTGAAGAATTTCTGATGATGATTTCCGATATTGAAATGCCGGAAATGGATGGCTATACCCTGACTACCGAGGTGCGGCACGA TCCGCGCATGCAAGGTATGCATATACTCCTGCATACTTCCCTTTCCGGCGTGTTCAACCAGAACATGGTGAAACGGGCGGGGGCGGATGACTTCCTCGCC AAGTTCCAGCCTGATGATCTCGCTGCCCGAGTGGCTGAGCGGATCAGGCAGGCGGATGCAAACTGAGGCTAGTTCCTCTCTCATGATGGTGAGGCTTTGA
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| DNA Sequence for Gene |
>F753_12330
TTGGTGTCAGTCGATCTGGATTTTGAGCAGTTCCGGGTGTTTCTTGAAAAGACGTGCGGCATTCTGCTGGGCAGTAACAAGCAGTATCTGGTGTCCAGTC GGCTGAACAAGCTGATGGAACAACAGGGCATCAAGACGCTGGGCGATCTGGTCCGGAAGATTCAGGCACAGCCACGTAGCGGGCTTCGGGAATTGGTCGT CGATGCTATGACGACCAACGAAACGCTCTGGTTTCGTGACACCTACCCTTTCGAAGTGCTCAAGAGTCGTGTACTGCCAGAGATGCTCAAGACTGGTGCG GGGCAGCGTCTGCGGATCTGGTCGGCGGCATGCTCGTCCGGGCAGGAACCGTACTCTCTGTCGATGTCCATCGATGAGTACGAGCGCAGCAATCCCAGTC AGGCGAAAACCGGGGTGCAGATCGTGGCTACCGAGCTGTCCGGCGCGATGCTTGCGGCGTGCAAGGCGGCAGAATACGACAGTCTGGCAATTGCTCGCGG CCTGTCCAGTGACCGCCTGCAGCGCTACTTCGATGTCAAGGCACCAGGGCGGTGGGCGGTCAAGCCCGCGATCCGTTCGCGGGTCGAGTTCAGGGTGCAG AATTTGCTCGACAGCTATGCCGCGCTGGGCAAGTTCGACATCGTGTTCTGCCGTAACGTACTGATCTACTTTTCCGCCGATGTGAAGAAGGACATTCTCA AGCGCATTCATGCGACGTTGCGCCCAGGCGGCTATCTGTTTCTTGGCGCCTCCGAAGCGCTCAATGGCCTGCCTGAGCTGTATCAGATGGTCCAGTGCAG TCCGGGAATCATCTACAAGGCGAAATAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCGGCATGACGCCGGCGGCAGAAAACCGTCATGCAACATGGCGGGTGCGGCAAAAAAGCGGTAAAGCCTTGCCGCTTTTGACGCCCTCTAACCAAGAGTT CTCTGGTTAGCCTTATAAAATCAATGGTTTGCGTTCAGTGGCATGAGCTTTGCTGGTGTTTGCGTAAGCAGACTTGTATCCGGCAGAGGGCCAGATCATG AGCATCAGTTTCGATAAGGCACTGGGTTTACACGAGAAGGCACTCGGTTTTCGCTCGCAGCGCGCCGAAGTGCTGGCGAACAATATCGCCAACGCCGACA CGCCTAACTATAAGGCTCGCGATCTGGACTTCAGCAGCGTGCTTGCCGAGCAGTCCGCTCGCAGCCAGGGTGGGTTCGGGGTAACGCGGACCAGTGACAA GCATATTGCCGCCGAGGGGTTGGAGATTGCCGATGCCTCCTTGCGCTTCCGCACTCCCGCGCATCCCTCGCTTGATCAGAACACTGTCGATCTGCAGATC
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| Amino Acid Sequence |
>chemotaxis protein CheR
MVSVDLDFEQFRVFLEKTCGILLGSNKQYLVSSRLNKLMEQQGIKTLGDLVRKIQAQPRSGLRELVVDAMTTNETLWFRDTYPFEVLKSRVLPEMLKTGA GQRLRIWSAACSSGQEPYSLSMSIDEYERSNPSQAKTGVQIVATELSGAMLAACKAAEYDSLAIARGLSSDRLQRYFDVKAPGRWAVKPAIRSRVEFRVQ NLLDSYAALGKFDIVFCRNVLIYFSADVKKDILKRIHATLRPGGYLFLGASEALNGLPELYQMVQCSPGIIYKAK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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