Pseudomonas chloritidismutans AW-1, F753_11585
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chloritidismutans AW-1 Scaffold_39_Contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACAACCGTGACGGCAGCTTCACCCCCGGCCTGTATGCACGCCTGAAGCTGGTCGGCAGCGCTACCTACGACGCCGTGCTGATCAAGGACGTCGCCGTCG GTACGGATCTGGGCAAGAAGTTCGTCCTGGTACTGGCCGAAGATGGCACTGTCGCCTACCGCCCGGTCGAGCTCGGTCCCAAGCTCGAAGGGCTGCGCAT CGTCCGCAGTGGCCTGGCCAAGGGCGAAAGCATCGTGGTCAACGGCCTTCAGCGGGTACGGCCGGGCAGCCAGGTGCAGCCGGAGTCGGTACCGATGGCC GACGCGGAGACCCTGGCCACATTGCGCCAGCAGAACCGTGCGATCAGCGAGGCGATGAAGCCGCAGGTCGACGAGCGCACCCTGGCCCAGCGCCCGAGCA GTTGACCGTCCGACAGCAGTCCTGAACTCCGGCGCGCCAGTCGCGCCCATCCGATCGATCCGCCAGGGCGCGCCCGCCGCGCCCTCCCCCGGAGTGCGCC
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| DNA Sequence for Gene |
>F753_11585
ATGAATTTCTCGCAATTCTTTATCAAGCGGCCGATTTTCGCCGCCGTGCTGTCGTTGGTGATCCTCATCGGCGGCGCCATCTCGCTGTTCCAGCTGCCGA TCAGCGAATATCCGGAAGTGGTGCCGCCCACCGTGGTGGTGCGCGCCAACTTCCCTGGCGCCAACCCCAAGGTGATCGGCGAAACCGTTGCCTCGCCGCT GGAACAGGCCATCACCGGCGTCGAGGGCATGCTCTACATGTCGTCCCAGGCGACCGCCGACGGCAAGCTGACGCTGACTATCACCTTCGGCCTGGGCACT GACCTGGACAACGCCCAGGTGCAGGTGCAGAACCGCGTCACGCGCACCATGCCGACCTTGCCGACCGAAGTGCAACGCCTCGGCGTGACCGTCGACAAGG CCTCCCCCGACCTGACCATGGTGGTGCACCTGACCTCGCCGGATCAGCGCTACGACATGCTCTACCTGTCCAACTACGCCGCACTCAACGTCAAGGACGA GCTGGCGCGGCTGGACGGCATCGGCGATGTGCAGCTGTTCGGCATGGGCGATTACTCCCTGCGCGTCTGGCTCGACCCGGAGAAGGTCGCCTCGCGCAAC CTCACCGCATCGGACGTAGTCAACGCGATTCGCGAGCAGAACCGCCAGGTCGCTGCAGGTTCTCTGGGCGCACCGCCGGCACCGGGCGCGACGGACTTCC AACTGTCGATCAACACCCAGGGCCGCCTGGTTACCGAGGAGGAATTCGAGAACATCATCATCCGCGCCGGCGAAGACGGCTCGATCACCCGCCTGCGGGA CATCGCCCGTGTCGAACTGGGCTCCAGCCAGTACGCGCTGCGTTCGCTGCTGAACAACCAGCCCGCCGTCGCCATTCCGGTATTCCAGCGCCCGGGTTCG AACGCCATCGAAATCTCCGATTCGGTACGGGCACGCATGGCAGAGCTGAAACGCGACTTCCCGGAAGGCGTGGACTACGAGATCGTCTACGACCCGACCA TCTTCGTGCGCGGCTCCATCGAGGCGGTGGTACACACCCTGCTCGAGGCCATCGTGCTGGTGGTGCTGGTGGTGATCCTGTTCCTGCAGACCTGGCGCGC CTCGATCATTCCGTTGGCCGCCGTGCCGGTGTCGCTGATCGGCACCTTAGCGGTCATGCACCTGCTCGGCTTCTCGCTCAACGCGCTGTCGCTGTTCGGC CTGGTGTTGGCCATCGGCATCGTGGTGGACGACGCCATCGTCGTGGTGGAAAACGTCGAGCGCAACATCGGTCTCGGCAAGTCGCCGGAGGAAGCGACCC GTCAGGCCATGAAGGAAGTGACCGGGCCGATCATCGCCACGGCGCTGGTCCTGTGCGCGGTGTTCATCCCGACGGCGTTCATTTCCGGCCTCACCGGGCA GTTCTACCAGCAGTTCGCGCTGACCATCGCCATTTCCACGGTGATCTCGGCCTTCAACTCGCTGACCCTGTCGCCGGCACTGGCCGCCGCACTCCTCAGG TCGCACGACGCACCAAAGGACGGCTTCTCGCGTCTGCTCGATCGAATTTTTGGTGGCTGGCTGTTCGCGCCGTTCAACCGCATGTTCGACCGCGCCAGCC ACGGCTACGTCGGCCTGGTGCGGCGCATCCTGCGCGGCAGCGGCATTGCGCTGGTGCTCTACGTCGGACTGGTCGGCCTCGGCTACATGGGCTTCGCCAG CACGCCGACCGGTTTCGTGCCACCGCAGGACAAGCAGTACCTGGTCGCCTTCGCCCAGCTGCCGGACGCCGCCACGCTGGACCGCACCGAGGACGTGATC AAGCGCATGTCGGAAATTGCCGGCAAGCACCCGGGCGTGGAGAACACGGTGGCCTTCCCAGGCTTGTCGATCAACGGCTTCACCAATAGCCCGAACAGCG GCATCGTATTCACCCCACTCAAGCCCTTCGATGAGCGCAAGGACCCGTCGCTCTCGGCGAACGCCATCGCGGCGGATCTCAACGGTCAGTTCGCGCAGAT CCAGGACGCCTTTATCGCCATCTTCCCGCCGCCACCCGTACAGGGCCTGGGCACCATCGGTGGCTTCCGCGTGCAGGTGCAGGACCGCGGCAACCTCGGC TACGAGGAGCTGTACAGCCAGGTGCAGAACGTCATCGCCAAGAGCGCGGACTATCCGGAGCTGGCCGGCCTGTTCACCAGCTATCAGGTGAACGTGCCGC AGGTGGACGCCGACATCGACCGGGAAAAAGCCAAGACCCACGGCGTGCCGATCGACGAGATCTTCGACACCATGCAGGTTTACCTCGGCTCGCTGTACGC CAACGACTTCAACCGCTTCGGCCGCACCTATCAGGTCAACGTCCAGGCCGACCAGAAGTTCCGCCTGGCACCGGAGCAGATCGGTCAGCTGAAGGTGCGC AACAACCGCGGCGAGATGGTCCCGCTGTCGACCTTCGTCAACGTCACGGACAGCGCCGGCCCGGATCGGGTGATGCACTACAACGGCTTCCTCACCGCAG AGATCAACGGCGCGGCCGCACCGGGCTATAGCTCCGGGCAGGCCGAGGCGGCCATGGAGCGCCTGCTCAAGGCTGAACTGCCGAATGGCATGAGCTACGA ATGGACCGAGCTGACCTACCAGCAGATCCTCGCCGGCAACACCGCGATATTCGTCTTCCCGCTCTGCGTGCTGCTGGCCTTCCTGGTGCTGGCCGCGCAA TACGAGAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTGCCGATGACTCTGCTCTCGGCGATCACCGGGGTGATCCTGGCCGGTGGCGACAACAACG TGTTCACCCAGATCGGCCTGATCGTGCTGGTGGGCCTGGCATGCAAGAACGCCATCCTCATCGTCGAGTTCGCCAAAGACAAACAGGAAGAAGGCATGGA CCGGCTGGCCGCGATCCTCGAAGCCTGCCGCCTGCGCCTGCGACCGATCCTGATGACCAGCTTCGCCTTCATCATGGGCGTGGTGCCGCTGGTGCTTTCC AGCGGGGCCGGTGCCGAGATGCGTCATGCCATGGGCGTCGCGGTGTTCAGCGGCATGCTCGGCGTCACCTTCTTCGGCCTGCTGCTGACCCCGGTGTTCT ATCTGGTGATTCGTGCCTTCGTCGAGAAACGCGAAGCCCGCAAAGCGGTTTACAAGGAGGCCCGCGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGTTCTTCGCCCTTTCCCTGCTCACTCTGGCACTGAGCGCCTGTGCGGTAGGCCCCGATTACCGGGCACCGCAGCCGGAACCGGCGCGTATCGACAGCGC TTCGGCTGGCGAATACGACCACTCACGCTTCGAAGCGGCCTGGTGGCAGCAGTTCGACGACCCGACGCTGGACGCCCTGGTAGGCGAAGCCCTGGCCGAG AACCGCGAACTGCGCATCGCCTATGCCCGCCTACGGGCGGCACGCGCTATTCGCTATGACGTCAGCAATGATCGTCTGCCCACTGTCACCGCGGGCGCCA GCGCCGATATCGGCAAGGCCCAGCAACCCGGCGTGACCGAACAGCGCGTGAATGCCGAACGCTACGACCTCGGGCTGGACATGGCCTGGGAACTGGACCT GTTCGGCCGCATCCAGCGCCGCCTGGAATCCAGCGAGGCGCAGGCGGATGCCGTCGAGGCCGAGCTCTACCAGCTGCAGGTCAGCCTGATCGCCGAGCTG
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| Amino Acid Sequence |
>transporter
MNFSQFFIKRPIFAAVLSLVILIGGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVASPLEQAITGVEGMLYMSSQATADGKLTLTITFGLGT DLDNAQVQVQNRVTRTMPTLPTEVQRLGVTVDKASPDLTMVVHLTSPDQRYDMLYLSNYAALNVKDELARLDGIGDVQLFGMGDYSLRVWLDPEKVASRN LTASDVVNAIREQNRQVAAGSLGAPPAPGATDFQLSINTQGRLVTEEEFENIIIRAGEDGSITRLRDIARVELGSSQYALRSLLNNQPAVAIPVFQRPGS NAIEISDSVRARMAELKRDFPEGVDYEIVYDPTIFVRGSIEAVVHTLLEAIVLVVLVVILFLQTWRASIIPLAAVPVSLIGTLAVMHLLGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIGLGKSPEEATRQAMKEVTGPIIATALVLCAVFIPTAFISGLTGQFYQQFALTIAISTVISAFNSLTLSPALAAALLR SHDAPKDGFSRLLDRIFGGWLFAPFNRMFDRASHGYVGLVRRILRGSGIALVLYVGLVGLGYMGFASTPTGFVPPQDKQYLVAFAQLPDAATLDRTEDVI KRMSEIAGKHPGVENTVAFPGLSINGFTNSPNSGIVFTPLKPFDERKDPSLSANAIAADLNGQFAQIQDAFIAIFPPPPVQGLGTIGGFRVQVQDRGNLG YEELYSQVQNVIAKSADYPELAGLFTSYQVNVPQVDADIDREKAKTHGVPIDEIFDTMQVYLGSLYANDFNRFGRTYQVNVQADQKFRLAPEQIGQLKVR NNRGEMVPLSTFVNVTDSAGPDRVMHYNGFLTAEINGAAAPGYSSGQAEAAMERLLKAELPNGMSYEWTELTYQQILAGNTAIFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVILAGGDNNVFTQIGLIVLVGLACKNAILIVEFAKDKQEEGMDRLAAILEACRLRLRPILMTSFAFIMGVVPLVLS SGAGAEMRHAMGVAVFSGMLGVTFFGLLLTPVFYLVIRAFVEKREARKAVYKEARA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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