Pseudomonas chloritidismutans AW-1, F753_11570
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chloritidismutans AW-1 Scaffold_39_Contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ATCGTGCTGGGCATCCTCTACGAAAGCTACATCCATCCGCTGACCATTCTCTCGACACTGCCATCGGCCGGGGTCGGCGCGCTGCTGGCGATCATCCTTA CCGGCGACCAGTTCAGCCTGATCTCGCTGCTCGGGCTGTTCCTGCTGATCGGCGTGGTGAAGAAGAACGCGATCCTGATGATCGACCTGGCCCTGCAGTT CGAGCGCAACGACAGGCTGTCGCCCGCCGATTCGATCCATCGCGCCTGCCTGCTGCGTTTCCGGCCGATCCTGATGACCACCATGGCTGCCATTCTCGGC GCGCTGCCGCTGCTGCTCGGCGGCGCGGAGGGCGCCGAGATGCGCCAGCCGTTGGGTCTGACCATCATCGGCGGTCTGCTGCTGAGCCAGATCCTGACCC TCTACACCACGCCGGTGGTCTATCTGTACCTCGACCGCCTGCGTCATCGTTTCAACAGCTGGCGCGGTGTTCGCACCGATGCCGCCCTGGAAAACCCGCT
|
|
| DNA Sequence for Gene |
>F753_11570
ATGAATCCGTCGTCGCTGAACCCCTCATCGCTGAAGCATGCCCTGCGGCCCCTCGCAGCTGCCGTGCTGGCCCTGTCGTTGGGCGCCTGTACCCTGGGGC CGGACTATCAACGTCCGGAGCTGCCCGTGGCTACCGAATTCAAACAGGCCGAAGGCTGGAAAGCCGCGGCGCCGGCCGATGTGCTGGAGCGTGGCGAGTG GTGGCGACTTTATGGCGATGCCGAGTTGGATGCCCTGGTCGCCCGGCTGAATGTCGACAATCAGAACCTGGCCGCGGCCGAGGCGCAGTTCCGTCAGGCC CGGGCACTGGTACGTGGTGCACGCTCGCAGCTGTTCCCGATCCTTTCCGGCAGCGCCGGCGTGACCCGTTCGGCGCAGGGCAGTGGTAGCTCGGACACCA GCGGCGGCTCGTTCGGCAGTGGCGTCAGCGAAAGCTACGAAGCGGGCCTGAGTGCGTCCTGGGAGGCGGATATCTGGGGCCGACTGCGGCGCAATCTGGA AGCGAACCGCGCCAGCATGCAGGCCAGCGCCGCAGACCTGGCCGCAGTGCGACTGAGCCTGCAAGCCGAGCTGGTGCAGACTTACCTGCAACTGCGGGTG ATCGACGAACATCAACGCCTGCTCGATCAGACCGTCGCGGCCTACGTGCGCTCGCTGCGTCTGACCGAGAACCAGTATCGGGCCGGTATCGTGCCGAAAT CCGACGTCGCCCAGGCGCAGACGCAACTCAAGAGCACCCAGGCCCAAGCCATCGATCTGCGCTGGCAGCGGGCACAGATGGAGCACGCGATCGCCGTGCT CATCGGCGTTGCACCCTCGGAACTGGACATCGCGGTGCGCGAGGATATCCCGGCGCTGCCAGGCGTGCCGCTGGCTGTGCCGTCGCAGCTGCTGGAGCGC CGCCCCGATATCGCCGCCGCCGAGCGCCAGGTCATGGCGGCCAATGCCAACATCGGCGTTGCCGAAGCGGCCTGGTACCCGGACCTGACGCTCTCCGCCA GCGGTGGCTACCGCAACAGCAGCTTCAGCGACCTGTTCAGCGTGCCCAACCGCTTCTGGTCGCTCGGCCCGCAACTGGCGCTGACGCTGCTCGACTTCGG CAGCCGCCGCGCCGAACTGGAGCGTGCCGAAGCCAGTTACGACCAGACCGTGGCCACTTACCGGCAGACCGTGCTCGACAGCTTCCGCGAGGTGGAGGAT TACCTGGTGCAGTTACGGGTGCTGGAAGAGGAGGCGGTGGTGCAGCGCGAGGCGCTGGAGGCGGCCCAGGAGTCCCTGCGTCTGATCGAGAACCAGTACC GGGCAGGCACTGTCGATTTCCTCAGCGTTGCCACGGTGCAGACCACCGCGCTGAACAACGAGCGCACCAACCTGACCCTGCTGGGCGATCGGCTGACCGC CAGTGTGCTGCTGATCGCCGCGCTCGGCGGTGGCTGGGATAGCCAGCAGCTGGATCAGCCACCGGCGGTTGCGACTTCGCCGGACGCGCCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTCCGGCCGCGAAGCCAGCACCCCAAAAAAAGCCCCGCCGGATCGGCGGGGCTTTTGCGTCTTATGCGGCGTCGCTTTCGGCGGTCAATTGCGCTGCTTG CGATTGACGGTCTGGGCTGCCTTGATGATGTCCGCGCCGATCACCGGCTCGAACTGCTGCCAAACCGGACGCATCGCTTCGCGCCAGCGCTCGCGCTCTT CTGGGGTCAGGCTGACGATCTCGGTCGTTCCCGCCTGACGAATGCGTTCACGATCGGCCTGATTCAGCTCTTCGGCCTCGCGGTTCACCATGTAGCTCAC CTCGTCGAGGATGGCTTCCAGCTCGAAACGGATCTTGTGCGGCATGCCCATCCAGAAACGGGTGTTGCTGACCACCATGTAATCGAGAACACCGTGGTCG CTCTCGATGATGTAGGGCTGCACGGTATGTATCTTCTTGCTGTAGATGTTCGACCAGGGATTCTCTGCGCCCTGTACGGTGCCGGTACGCAGGGCGTCGT
|
|
| Amino Acid Sequence |
>RND transporter
MNPSSLNPSSLKHALRPLAAAVLALSLGACTLGPDYQRPELPVATEFKQAEGWKAAAPADVLERGEWWRLYGDAELDALVARLNVDNQNLAAAEAQFRQA RALVRGARSQLFPILSGSAGVTRSAQGSGSSDTSGGSFGSGVSESYEAGLSASWEADIWGRLRRNLEANRASMQASAADLAAVRLSLQAELVQTYLQLRV IDEHQRLLDQTVAAYVRSLRLTENQYRAGIVPKSDVAQAQTQLKSTQAQAIDLRWQRAQMEHAIAVLIGVAPSELDIAVREDIPALPGVPLAVPSQLLER RPDIAAAERQVMAANANIGVAEAAWYPDLTLSASGGYRNSSFSDLFSVPNRFWSLGPQLALTLLDFGSRRAELERAEASYDQTVATYRQTVLDSFREVED YLVQLRVLEEEAVVQREALEAAQESLRLIENQYRAGTVDFLSVATVQTTALNNERTNLTLLGDRLTASVLLIAALGGGWDSQQLDQPPAVATSPDAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|