Pseudomonas chloritidismutans AW-1, F753_07580
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chloritidismutans AW-1 Scaffold_29_Contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGAAGAACATCGGGCCATCCGGGCTGGTGGTCGTTATCGTTCGTGAAGACCTGCTCGGCCATGCGCGTTCCGCTTGCCCGACCATGCTCGACTACAAGG TCGCGGCGGATAACGGCTCGATGTACAACACGCCGGCAACCTTTTCCTGGTATCTCTCGGGGCTGGTCTTCGAGTGGCTGAAGGAGCAGGGCGGCGTCGA GGCGATGGAGCAGCGCAACCGCGCCAAGAAGGACATGCTCTACGGTGCCATCGATGCCAGCGATTTCTACACCAACCCGATCGCCATCAATGCGCGTTCG TGGATGAACGTTCCGTTCCGTCTGGCCGATGAGCGTCTGGACAAGGCGTTCCTGGCCGGCGCCGACGCGCGTGGCCTGTTGAACCTCAAAGGGCATCGCT CCGTGGGTGGCATGCGCGCTTCTATCTACAACGCCGTAGGCCTGGATGCGGTCGAAGCGCTGGTGGCCTACATGGCCGAGTTCGAGAAGGAGCACGGCTG
|
|
| DNA Sequence for Gene |
>F753_07580
ATGAGCGACGCCGATCAGTTGAAGGCCCTGCGGGTTCGAATCGACAGCCTCGACGAGCGCATTCTCGATCTGATCAGCGAGCGCGCCCGCTGTGCCCAGG AAGTCGCCCGGGTCAAGACCGCGGCGCTGGCCGAGGGCGAGTCCGCGGTGTTCTACCGTCCGGAGCGCGAAGCCTGGGTGCTCAAGCACATCATGGAGCT CAACCGCGGGCCGCTCGATAACGAGGAAATGGCGCGTCTGTTCCGCGAGATCATGTCGTCCTGCCTGGCCCTGGAACAGCCGCTCCGGGTTGCCTATCTC GGCCCAGAGGGTACCTTCTCCCAGGCTGCGGCGCTCAAGCATTTCGGCCATGCGGTCATCAGTACGCCAATGGCAGCCATTGATGAGGTGTTTCGCGAGG TTGTGGCGGGGGCTGTGAATTTCGGCGTAGTGCCGGTGGAGAACTCCACCGAAGGTGCAGTCAATCACACGCTGGACAGCTTCCTCGAGCACGACATCGT GATCTGCGGCGAAGTGGAGCTGCGTATCCACCACCATTTGTTGGTGGGCGAGACGACCAAGACTGATCGGATCACGCGCATCTACTCCCACGCGCAATCG CTGGCGCAGTGCCGCAAGTGGCTTGATGCCCACTACCCGAATGTCGAGCGCGTAGCGGTTTCCAGCAATGCGGATGCGGCCAAGCGGGTCAAGAGCGAGT GGAATTCGGCGGCCATCGCCGGCGACATGGCTGCCCAGCTCTACGGTCTGACCAAGCTGGCCGAGAAGATTGAGGACCGCCCGGACAACTCCACGCGATT CCTGATTATCGGTAGCCAGGAAGTGCCGCCGACCGGCGATGACAAGACCTCTATCATCGTCTCGATGCGTAACAAGCCAGGCGCCTTGCACGAGCTGCTG GTGCCGTTCCATGCCAACGGCATCGACCTTACTCGAATCGAAACGCGGCCGTCGCGCAGCGGCAAGTGGACCTACGTGTTCTTCATCGATTTCCTGGGTC ACCACCAGGATCCGCTGATCAAGGATGCGCTGGAAAAGCTCGGGCAGGAAGCTGTGGCCCTTAAGGTGTTGGGTTCCTACCCCAAAGCGGTTCTTTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTGCGGCTTCAGGTCGCGGCAGTGGGGCAGGCGACCGGCTTGTACCTGCCGTCTGAAGCCTGCAGCCTGAGGTTTTGTTATGAGTTGTGATTTCCTCGCC CTGGCGCAGCCAGGGGTGCAGAAGCTGTCGCCGTACGTACCGGGCAAGCCGGTTGAAGAACTGGCGCGCGAGCTGAGTTTGGACCCCGCAGGAATCGTCA AGCTGGCCAGCAACGAGAACCCGCTAGGGCCAAGCCCGAAAGTGCTTGATGCGATCAGGGCTGAGCTTTCGGAGTTGACCCGCTACCCGGACGGCAACGG CTTCGCGCTCAAGCAGCGACTTGCCGAGCGCTATTCGGTCGGAATCAATCAAGTCACCCTGGGCAATGGTTCCAACGACATTCTTGAGCTGGTTGCGCGC GCCTATCTGGCTCCGGGCCTCAACGCCGTGTTCAGCGAGCATGCCTTCGCTGTCTATCCGATCGCGACGCAGGCGGTCGGGGCCGAGGGACGTGCCGTGC
|
|
| Amino Acid Sequence |
>prephenate dehydratase
MSDADQLKALRVRIDSLDERILDLISERARCAQEVARVKTAALAEGESAVFYRPEREAWVLKHIMELNRGPLDNEEMARLFREIMSSCLALEQPLRVAYL GPEGTFSQAAALKHFGHAVISTPMAAIDEVFREVVAGAVNFGVVPVENSTEGAVNHTLDSFLEHDIVICGEVELRIHHHLLVGETTKTDRITRIYSHAQS LAQCRKWLDAHYPNVERVAVSSNADAAKRVKSEWNSAAIAGDMAAQLYGLTKLAEKIEDRPDNSTRFLIIGSQEVPPTGDDKTSIIVSMRNKPGALHELL VPFHANGIDLTRIETRPSRSGKWTYVFFIDFLGHHQDPLIKDALEKLGQEAVALKVLGSYPKAVL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|