Pseudomonas chloritidismutans AW-1, F753_04610
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chloritidismutans AW-1 Scaffold_22_Contig_1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACCAGCAACCAGTCGCACGCCGGCATCTTTGCCGCATCGCGATAGACCTGCGGCCGCTCCAACAGCAACGATCCATGAACGGCACTGTTCACCTGTAAG CCGCGCTCGCACACCGCGGCGTATTCGCTACGCAAAAGAAAGTGCACATCGTAGCCGGCACGCGCCAGCATCAAACCGTAAAAACCGCCGATGGCACCGG TGCCGATGATGCCGATACGTGGACTCGCTGCAGACATAAGCACTCCAGATCAGGGGACCGGCTGCGCTCGCCGCGCCAACCGGTAAAAGGTCGAACGATA GCAGTCCGGCACGCAACGTCCCAGCGACTAGCGTGGCAGCGTGAAGGGTACGCAAGCGGCAAGCCTCAATAGGCCATCAATCTCGTTGTCGAGTGCGGCC TTTAGCGATAAGGTTCCGTTTCCCCGCTGCGCCCTCAGGCTGTGTTCCGCCGCACCGGGATCGCTGGCGGACGGCTCCCGTGATTCCTGACGAGTAACAA
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| DNA Sequence for Gene |
>F753_04610
ATGGCTGATTTACCAATCGACGACCTTAACGTTGCCTCCAACGTGACCCTCATCACGCCGGAGCAACTGAAGCGTGAAATTCCGCTGACCGCCTCGGCAC TGCAGACCGTCTCCCACGGGCGCCAGGTGGTACGCGACATTCTCGACGGCAAGGATCACCGCCTGTTCATAGTGATCGGCCCTTGCTCCATTCACGATCT GAAGGCCGCCCACGAGTACGCCGAGCGTCTCAAGGTGCTGGCAGAAAAGGTGTCCGACAGCCTCTTCCTCGTCATGCGGGTGTATTTCGAGAAGCCGCGC ACCACCGTCGGCTGGAAAGGCCTGATCAACGATCCGTATATGGACGACTCGTTCAAGATCCAGGACGGGCTGCACATCGGTCGCAAGCTGCTTCTCGACC TTGCCGAGATGGGTCTGCCCACCGCGACCGAAGCGCTCGATCCGATTTCGCCGCAATACCTGCAGGACCTGATCAGCTGGTCGGCGATTGGCGCACGAAC AACCGAATCCCAGACGCACCGCGAGATGGCCTCGGGCCTGTCCTCCGCTGTCGGCTTCAAGAACGGCACCGACGGCAGCCTGACCGTGGCAATCAACGCC CTGCAGTCGGTTTCCAGCCCGCACCGCTTCCTCGGCATCAACCAGTCCGGCGGCGTCTCCATCGTCACCACCAAGGGCAACAACTACGGACATGTGGTCC TGCGCGGTGGCAACGGCAAGCCCAACTACGACTCGGTCAGCGTCGCGCTGTGCGAGCAGGATCTGAAGAAGGCGGGCATCCGCCCCAATGTGATGATCGA CTGCAGCCACGCGAACTCCAACAAGGACCCTGCCCTGCAGCCGTTGGTAATGGACAACGTCGCCAATCAGATTCTGGAAGGCAACAACTCCATCGTTGGC CTGATGGTGGAAAGCCACCTTGGCTGGGGTAACCAGTCCATTCCGAAGGATCTGAGTGATCTCAAGTACGGCGTATCGATCACCGATGCCTGTATCGACT GGGAAACCACCGAGAAAGCGGTGATGAGCATGCACGACAAGCTAAAGGACGTACTGCCAAGACGGCAGCGCGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACGAAAAACGCCGGTCTCCCGGCGTTTTTTTATGGGGTCGGTTCCACCCTGTCCGAGGTCGGTCGATTGCGCTCGATGTAACGTTCGACATAGGAACAC GACGGAATCACCTGGTACCCCTCGCGCTCGGCATATTCGAGCGCGTGCTGCGTCAGCACAGCAGCGATGCCTCGCCCACGCAGCGCATCCGGAACGAAGG TCCGGTACATGTCCAGCGTCTGCTTGCCCAAATCCATATAGGCCAGATAGGCACAATGACCGTCGATCACCGCCTCGAAGCGATGCCCCGCCAGGTCATG GTGAACACGCACCGTATCGCTCATTTTGACTCCTCAGCAGGATTGCCCTGTCTTCTTGTTCTCGATCACGCTGCGGTCCATGACGCAGAACTGGCAGCCG AAACATACACAGGTGTCTTTTCTACCTGTTTCGCATCCGTTCGAACAGCCTCAGCTGATCAATATTTGTGCGCGGCATTGAAGGAACTTTCGATCAAACA
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| Amino Acid Sequence |
>phospho-2-dehydro-3-deoxyheptonate aldolase
MADLPIDDLNVASNVTLITPEQLKREIPLTASALQTVSHGRQVVRDILDGKDHRLFIVIGPCSIHDLKAAHEYAERLKVLAEKVSDSLFLVMRVYFEKPR TTVGWKGLINDPYMDDSFKIQDGLHIGRKLLLDLAEMGLPTATEALDPISPQYLQDLISWSAIGARTTESQTHREMASGLSSAVGFKNGTDGSLTVAINA LQSVSSPHRFLGINQSGGVSIVTTKGNNYGHVVLRGGNGKPNYDSVSVALCEQDLKKAGIRPNVMIDCSHANSNKDPALQPLVMDNVANQILEGNNSIVG LMVESHLGWGNQSIPKDLSDLKYGVSITDACIDWETTEKAVMSMHDKLKDVLPRRQRD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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