Strain | Pseudomonas chloritidismutans AW-1 Scaffold_16_Contig_1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCATGCGCTTGAGCCCGACCGCCTGGTCTTCCACCACATGATCGAGCAGCACCCGATGCTCGGCGCAGAACGACGCCACCGCGCCCGCCCACCAGGTCG CCAGGCTGTCGGCATTCAGGGCAATACGCAATCGCTCGGGCAGGCGATTTTCGTCCAGCGCCGGGACCTGCCCTTGCAGGTCCCGCTCGAGCAAGCGCAC CTGCTGCACATGGTTGAGCAATCGTTGACCCAGCTCGGTCGGCCGGGGCGGCGTATCGCGCAGCAGCACCGGCTGGCCGACGCGCGCCTCGAGTAATTTG ATCCGCTGGGATATGGCCGATTGCGAAAGCCCCAACGCCTGCGCGGCTCGTTCGAAACCTGCCTGCTCGACAACCGCCGCAAGCGCCGCGAGTAATTTGT AATCGAACATCAGTATTCCTAATGCACCCTGAAGAGAATTTGTTTCTCTTATAACGCCCCGCTGCCCAGACTCACCAGTAAATCAGACGAGGCGTGCGGC
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DNA Sequence for Gene |
>F753_03205
ATGAATGCAATCTGGCAAAGCTATATCAACGGCCTTCTGGTCGCGGCGGGGCTGATCATGGCGATCGGCGCGCAGAATGCGTTCGTGCTCGCGCAAAGCC TGCGCCGGGAGCACCATCTGCCAGTGGCGGCGCTGTGCATCCTCTGTGACGTACTGTTGGTCAGCGTCGGCGTCTTCGGGCTGGCAGCAGTGCTGGCGGA CAACCCGCTACTGCTGGAGATCACTCGCTGGGGCGGCGTCGCCTTCCTGCTCTGGTACGGCACCCTGGCGCTGCGTCGCGCGTTCAAGCCACAGAGCCTG CGCAGCGCTGATGCGCAGCCGCGACCACTGCGTGCGGTGCTGTTGGCCGCGCTGGCGGTGACGTTGCTCAATCCGCACGTCTATCTCGATACAGTGGTAC TGATCGGCTCACTCGGCGCACAGCAGCCCGAGCCAGGCGCCTACACACTGGGCGCTGCCAGTGCATCGACCCTGTGGTTCATGACCCTTGCGCTCGGTGG CGCCTGGCTTGCACCCTGGCTGGCCCGCCCGCTGACCTGGCGTCTGATCGACCTCGGCGTCGCCGCCATGATGTTCGCGATTGCCGCACAGCTCGCATTC GCCAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCCCTAGCGCGCGACAACCGGCCGCGCGCCATTTTTGCAGGTCGCAAGGAACGCCCGGCCCGACGGCGCGGTCCACGCAAGGCGCAGCCAGTTGTTTGC ATCCGCTGCTTCGCCTCGCCAACCCCTCTGGAACCTATATTCCATACAGTTGCCGCGTGGTTTTGCCGCAGGTCGGGTGCTATGATCGCTGGCTCGCAGA CATGAAGCGGAAGGCTTCAGTCTGTCTGTTCGGCCGACCGTGAACGGCCAGAGATTGCGCAAGCATGTAGCGAGCGAAGGGAACGACAGAGGTCAGGGCG GGACGCACATTCGCTCCTGCTCACCGGTATCGCCGGCACGCCTCGCACGCTCCTTCCAGCTGGCCGCATCAATCCTCGACACCTGAGTAGGAGATACATC ATGGCTTTCGAATTGCCGCCGCTGCCGTACGAAAAGAACGCTCTCGAGCCGCACATGTCCGCCGAGACGCTCGAGTTTCACCACGACAAGCACCACGCTG
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Amino Acid Sequence |
>amino acid transporter LysE
MNAIWQSYINGLLVAAGLIMAIGAQNAFVLAQSLRREHHLPVAALCILCDVLLVSVGVFGLAAVLADNPLLLEITRWGGVAFLLWYGTLALRRAFKPQSL RSADAQPRPLRAVLLAALAVTLLNPHVYLDTVVLIGSLGAQQPEPGAYTLGAASASTLWFMTLALGGAWLAPWLARPLTWRLIDLGVAAMMFAIAAQLAF AS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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