Pseudomonas chlororaphis HT66, M217_RS0118305

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000028, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAAGCCGTGGCCTGGGACCCGCGCAAGCAGCAATTGCTGCTGGGCGAGGAGCGCCCGCCGGCGCTGTTCACCTGGAACAGCGACGGCAGCCAGACCCTCA AGGGTGACAAGCAGAAGCTGGAAAGCGATGAGCTGGACCTGCGCAACCTGTCCGCCCTGAGCATCGACCCACGTACCGGTCACACCCTGGTGCTGTCCGC CGACTCACACATGCTGCTGGAGCTGGACGAAACCGGCGAGCAGGTCAGCTTCATGACCTTGCTGGGCGGTTTCAACGGCCTGAAAAACACCATTCCGCGG GCCGAGGGCGTGGCCATGGATGAGCAGGGCAACCTGTACATGGTCAGTGAACCCAACCTGTTCTATCGCTTTGAGAAGCACTGATTCAGAGGTTTCTGGC GGCCAAAGGCCATAAATCCGGCATACGCCCGCTGCGATTAAGTTTAAATTCATCCGGCTGTGATATTTCATCCGCCTGATTTGTATTTGAGCTTGCCAGC
DNA Sequence for Gene
>M217_RS0118305
ATGCGTCGACTCGCCTATCCCAAACCGCTGTTCCTCCTCCTGTGTTTTATCGTGCTGGTGCTGTTGGGCATTGCCGGGCAGCACCACCGTTACTTCGAGC GCCTGTGGTTCAACTGGCGGGTCATGTCGCAGCCGGTCAACACCGACGCCATTGGCCTGGATGGCTATCGGGTGACCCTCGAAGGGCAAAAGATCGAGGG TCTGGACGACGTCTCGGCGCTGACCTACGACCCGGTGCGCAAAAGCCTGTTCACCGTGACCAACAAGAATTCCGAGCTGATCGAGCTGTCGCTCGACGGG CGCATTCTGCGACGCATCGCCCTGACCGGCTTTGGCGACCCGGAAGCGGTCGAGTTCATCAGCGCCGACACCTACGTGATCACCGACGAGCGCCAGCAGC GACTGATCAAGATTCATCTGGAGGAGGACACGGTGTTCCTCGACGCCGCGGACGCCGAGCAGATGACCCTGGGTGTGCACATGAGCGGCAACAAGGGGTT CGAGGGGCTGGCCTACGATTCGGTGGGCAAGCGCCTGTTCGTCGCCAAGGAGCGCGACCCGATGCTGATCTACGAGGTCAAGGGCTTCCCGCATTACGAC CCGGAGAAGTCCTACGCGGTGCATGTGGTCAACAACCCCAAGCGCGATGCCGGGTTGTTCGTGCGTGACCTGTCCAGCCTGCAATACGACGAGCGCACCG GGCATCTGCTGGCGCTGTCGGATGAGTCATGGCTGGTGCTGGAACTGGATGTGGATGGCCGGCCCCTGAGCACCATGTCGCTGCGCAAGGGCCGGCAAGG GTTGCAGGCCACGGTGCCGCAGGCCGAAGGCATTGCCATGGACGACGACGGCACCCTGTACCTGGTCAGTGAGCCGAACCTGTTCTACGTCTTCAAGAAG CCGGCCCAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCCTTAGAACTGCCACTGCACGCCGAGGGAATAGCCGGTCTGGCTGCCTTCGGCGTGACCGATCCGGCCGTTGACCTCGGCGTACAGCCCCAGCTGCGG CGTGATTGCCAGCTGGCTGCCGAGCTGGGCGCGGCCGAAGCTTTTGTCCACACCACCCAGGCGAGCCACGCGCACCTGACCATCGGCTCGGCTGGTCAGG TCCAGGTCGTCCAGGCGGCCGTCCCCCAGCTCCTTGACCCAGGCCAGGTCGCCATAAGGCAACAGGCTCATGCCGTAGGGCAGAGCGACGGCACCGCGAA CGCGCCAGCCGAGGCTGGCTTCCAGCGAATCGAATGACTGCTCCTCATAACTCAGTGCGGTGCGCAGGTCCTGCTTCTCGTGGAACTGGTCGATGCGGTA GTGGGTGTAATCGAGGCCGGCGAAGGGGCCGCTCTTGATCGCGCCGAAATCCAGGTCGTAACCACCGAGCACGCGGGCGCCCAGGGTCAGGGCGTCGGTA
Amino Acid Sequence
>DNA-binding protein
MRRLAYPKPLFLLLCFIVLVLLGIAGQHHRYFERLWFNWRVMSQPVNTDAIGLDGYRVTLEGQKIEGLDDVSALTYDPVRKSLFTVTNKNSELIELSLDG RILRRIALTGFGDPEAVEFISADTYVITDERQQRLIKIHLEEDTVFLDAADAEQMTLGVHMSGNKGFEGLAYDSVGKRLFVAKERDPMLIYEVKGFPHYD PEKSYAVHVVNNPKRDAGLFVRDLSSLQYDERTGHLLALSDESWLVLELDVDGRPLSTMSLRKGRQGLQATVPQAEGIAMDDDGTLYLVSEPNLFYVFKK PAQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site