Pseudomonas chlororaphis HT66, M217_RS0116265

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000028, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TGGGTCAGCTCCAACTATGCGGCGGTGGCCTGCATCGACCTGCCGACCTGCCACGGCCAGTGGTGGCCGGCGGCGGATTTCGCCAACGGCTTTCACCTGA CCCAACACATCGGGCCCAACTACCTGGGTGGGCAGCTCGACAGCGACGCCCGCACCGCCATCCACCTGACCCATCGCATCGGCGCGTTGCTGGTGACCCT GGTGTTGCTCGGCCTGGCCTGGCAACTCAAGCACGTGGGCATGACCCGCCTCGCCGGGCTGGTGCTGGTGGCGCTGGCGGTGCAGATCGGCCTCGGCATC AGCAACGTGCTGTTCCACCTGCCACTGCCAGTGGCCGTGGCGCATAACGCGGGCGGCGCGGCGCTGCTGCTGACCCTGGTGCTGGTCAACTATCACGCCC GCACCAGCCTGGTCCGCGCCCGCTCGCACCTGCCGCTGGGCTGGCGCCTGAGCCCGCGTAAACATGCCGCCGGGCCCATAACCATAAAAGGAGAGATGCC
DNA Sequence for Gene
>M217_RS0116265
ATGGCGACTCTGATCGGCGAGCGTCACCGCCAGGCGATCTGGCGTGACTACCTGGAGCTGACCAAGCCCAAGGTGGTGGTGCTGATGCTCATTACCTCGC TGGTGGGCATGTTCCTCGCCACCCGCGCCGGGGTGCCGTGGACAGTGCTGGTGTTCGGCAACCTGGGCATTGCCCTGTGCGCCGGCGCGGCGGCAGCAGT GAACCATGTGGTGGACCGGCGAATCGATGCGGTCATGGCGCGCACCCACAAACGGCCGCTGGCCGAAGGCCGGGTATCGCCGCCGGCGGCGCTGGGTTTC GCCCTGCTGCTGGCCATCGCCGGGCAAGCCTTGCTGCTGACGTTCACCAATCCGCTGACCGCCTGGCTGACCCTGGCGTCGCTGCTCGGTTATGCGGTGA TCTACACCGGCTTCCTCAAGCGGGCGACCCCGCAGAACATCGTGATCGGCGGTTTGGCCGGGGCCGCGCCACCGCTGTTGGGCTGGGTTGCGGCCACCGG GCATGTGACGGCCGAACCGCTGTTGCTGGTGCTGATCATCTTCGCCTGGACCCCGCCGCACTTCTGGGCCTTGGCCATTCACCGCAAGGAGGAGTACGCC AAGGCCGATATCCCGATGCTGCCGGTGACCCACGGCGAGCACTACACCAAGGTGCATATCCTGCTCTACACCTTCGCCCTGCTGGCGGTCAGCCTGCTGC CCTATGCGATCCACATGAGCGGCCTGCTCTACCTGATTTGTGCCCTGGGCCTGGGCGCGCGCTTTCTGCAATGGGCCTGGGTGCTGTACCGTGGCAGTCG GCCGCACGCGGCGATCAACACCTTCAAGTACTCTATTTATTACTTGTTCCTGCTGTTTATCGCGCTGCTCGTAGACCACTACCTATTGTTGAACCTATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTCGAACTCAGAAAACCGTCTTTATTCTCGTGGCGCTGGTGGCCCTGGTGCTGGGGCTCACCGTCAACAAAGTGCTGACCGGCAAGAACCAGGGGGACCC GACCGCGTTGATCGACGCCGGGATCATCCTGCTGCCCCAGAGCCGCAACCTGCCGGATGTGAAGATGACCGACCAGGAAGGCCAGCCGGTGGTGCTCAAT GAGCTCAAGGGCAAGTGGAGCCTGCTGTTCTTCGGCTACACCTTCTGCCCGGACATCTGCCCGACCACCCTCGCCCAGCTGCGCCAGATCAAGAGCGAGC TGCCCAAGGAGGCGGTGGACAACCTGCAGGTGGTGCTGGTCAGCGTCGACCCGAACCGCGATACGCCGCAGCAGCTGAAACAGTACCTGGGCTACTTCGA CAAGGACTTCAAGGGCCTGACCGCGACCTCGGTGGCGGACGTGCAGAAGCTCGCCAATGCGGTGAGCATCCCCTTCATTCCGGCGGACACCAGCAAGCCC
Amino Acid Sequence
>protoheme IX farnesyltransferase
MATLIGERHRQAIWRDYLELTKPKVVVLMLITSLVGMFLATRAGVPWTVLVFGNLGIALCAGAAAAVNHVVDRRIDAVMARTHKRPLAEGRVSPPAALGF ALLLAIAGQALLLTFTNPLTAWLTLASLLGYAVIYTGFLKRATPQNIVIGGLAGAAPPLLGWVAATGHVTAEPLLLVLIIFAWTPPHFWALAIHRKEEYA KADIPMLPVTHGEHYTKVHILLYTFALLAVSLLPYAIHMSGLLYLICALGLGARFLQWAWVLYRGSRPHAAINTFKYSIYYLFLLFIALLVDHYLLLNL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site