Pseudomonas chlororaphis HT66, M217_RS0113720

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000026, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ATCAAGCTGGCGGTTTTCGACGTGGATGGCGTACTGACCGACGGTCGCCTGTACTTCCTCGAAGACGGCAGCGAGTTCAAGACCTTCAACACCCTCGATG GCCAGGGCATCAAGATGCTGATGGCCACGGGCGTACAGACGGCAATCATCAGCGGGCGCAAGACGCCGGTGGTCGAGCGCCGGGCGAAAAACCTGGGGAT TCCCCATCTGTTTCAGGGCCGCGAGGACAAACTGGTGGTGCTGGACGGGCTTCTTGCCCAACTGGGCCTAAGCTATGAGCAGGTCGCCTACCTGGGCGAC GACCTGCCGGACCTGCCGGTGATCCGCCGGGTCGGCCTGGGCATGGCCGTCGCCAATGCCGCCAGTTTTGTCCGTGAACACGCCCATGGCGTTACCCAGG CCCGTGGCGGCGAAGGTGCCGCCCGCGAGTTCTGCGAGTTGATCCTGCGCGCCCAAGGCAGCCTTGAAGCGGCCCACGCCGCCTACTTATAGAGCCTCCC
DNA Sequence for Gene
>M217_RS0113720
ATGCTGAGCAAAAAGATTCGCAACATCCTGATCTTCGGCATCATCACCGTGCTGTTCCTGGCGGTGGGATACTGGAACATCAGCCCGGAACGCTTCCTCG ACAAGCCGGTCGCGCAGGTCGACGAAAGCGCCATCGACTACTACGCCATCAACGCCCGTAGCGTGCAGTACCTGCCTGACGGCAAGCTGCAGTACGAAAT GACGTCCGACAAGGTCGAACACCTCAAGGCCAGCGAGGTGACGCTGCTGACCAAGCCGGACCTGCAGATGTATCGCGGCACCGCCTTCCCCTGGCACGTC CAGAGCGAGCACGGCGAAGTCAACCCGGATGGCACCCAGGTCGAGTTGATCGATTCGGTACGGGTTTCCCGCACCGACGAGAAAAATCGCAACCTGCTGA TCACCACGACCCGCATGACAGTATTCCCGCAGAAGCAATATGCGCAGACCGACCAAGACGTTAGAATCGACGGCGCCGGCGGCGTGACGACTGGCAAGGG AATGAAAGCGTATTTGAAAGACGGCAGGATGAACCTGCTATCGAACGTAAGAGGACAGTATGAGGCTCGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AACCCTCCCTATTTTGCTCGGTCTGGGCGCAGCACTGGGAAGCGTGAGCGCCTGGGCTCTGCCGAACGATAGCCAGCAACCAATCCGCATCCAGGCCGAC GACGCTCAACTGGACGACAAGAATGGCGTAGCCACCTACAGAGGCGACGTGATCATCACCCAGGGTTCGATGAAGGTCACCGGCAATACCGTGACCATCA CCCGTACCCAGACCGGTGATATCGACGTGGTGACCTCCGTGGGCAACCTGGCCTACTTCGAACAGATTCAAACCCAGGGCGACACCAAGCCGGTCCAGGG CTACGGCGTGACCATCCAGTACCACGCCGCGCAGAACCGCGTCGTGCTGATCGACCGCGCCAAAGTCGTCGACAAGGATGGCAACATCACCCAGGGCGAG AAAATCGTCTACGACACCAACAAGAAGCTGGCCAGCGCCGGTCGTGCCACCGGCAGCAAGGTCACCGAGTCGCGCCCACGGATCGACATGGTCATCCAGC
Amino Acid Sequence
>lipopolysaccharide ABC transporter permease
MLSKKIRNILIFGIITVLFLAVGYWNISPERFLDKPVAQVDESAIDYYAINARSVQYLPDGKLQYEMTSDKVEHLKASEVTLLTKPDLQMYRGTAFPWHV QSEHGEVNPDGTQVELIDSVRVSRTDEKNRNLLITTTRMTVFPQKQYAQTDQDVRIDGAGGVTTGKGMKAYLKDGRMNLLSNVRGQYEAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site