Pseudomonas chlororaphis HT66, M217_RS0111270 (fabG)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis HT66 contig000023, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGGAAATACCGGTAGTAGCGTTCGGCCGCCGCCTCGATCGCCGCAGCGTCTTCGAGCTTTTCGGCTTCGGCCAGATAGGTCAGGCGTCCCACCGCCTG GACGTCCTCGGCTTCGCGCTCGCCCACCAGCAGCGAACACTTGGGATCCTTCTGCAGGTTATGGGTGTGCTGGGCAATGCGGCTGATCAGGATCAGCGGC CGCCCCTGCTCGTCCAGGCAATAAGGAACCACCGAGCCGAAGGGAAAACCCGGCATGGCCTTGGAGTGCGTCGACAGCACGCCACGGTATTCCTTGAGCA GTAATTCTCGTGCATGCTTCGCAGCTTCAACGCTCAATTTATGACTCCTTATATAGAATCCGTCGAAAACGGACGGGCGTCCGGAGCAAAGTTCCAGCGA CGCCATCGGGGCAATTCTCAATCTGCAGCCAGGCCATGCCCGACGCACAAGAGAGGCGCCTTAAAGGACACCACTCCAGTTCTGCTTTCGGAGCATGCGA
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| DNA Sequence for Gene |
>M217_RS0111270
|fabG
ATGCAACTCAATGACAAAGTAATCATTATCACCGGCGGTTGCCAGGGTCTGGGCCGATCCATGGCGGAGTATTTCGTCAGCAAAGGCGCCAGGCTGGCAC TGGTCGACCTGAACCAGGAAAAGCTCGACCAGGCCGTTGCCGCCTGCCAGGCCGCCGGAGTCGAGGCCCGCGCCTACCTGTGCAACGTCGCCAATGAAGA ACAGGTGGAACACATGGTCGCCCAGGTCGCCGAGGACTTCGGCGCCATTCACGGCCTGATCAACAACGCCGGCATCCTGCGCGACGGCCTGCTGCTCAAG GTCAAGGACGGCGAGATGAGCAAGATGAGCCTGGCCCAATGGCAGTCGGTGATCGACGTCAACCTGACCGGCGTGTTCCTCTGCACCCGCGAAGTCGCGG CGAAGATGATCGAGCTGAAAACCAGCGGCGCGATCATCAACATCTCGTCGATCTCCCGTGCCGGCAATATCGGCCAGACCAACTACTCCGCCGCCAAGGC CGGGGTTGCCGCGGCGACCGTGACCTGGGCCAAGGAACTGGCGCGCTACGGCATCCGCGTGGCGGGCATCGCCCCGGGCTTCATCGAAACCGAAATGACC CTGGGCATGAAACCCGAGGCCCTGGAGAAAATGACCTCCGGCATCCCGCTCAAGCGCATGGGCAAGCCGGAAGAAATCGCTCACTCGGCGGCCTATATCT TCGAGAACGACTACTACACCGGCCGGATCCTCGAGCTGGATGGCGGACTGCGGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AACCCGCCTCTAAAGAACCGCCCATAAAAAAGCCCGATGCAGTGCACCGGGCTTTTTGTTTGCCCAATCGGCTCAGTCGTCGCTGACGGTAATGTTCGGC ATCGCCGGCGCCGCGGCTTCCTGCAACACGATGCGCGCGCCGACATGGCGGGCCAGTTCCTGATAGACCATGGCGATCTGGCTTTCCGGCTCGGCGATCA CGGTCGGCTTGCCGCCATCGGCCTGCTCGCGAATCAGCATCGACAGCGGCAGCGAGGCCAGCAGTTCGACCCCGTACTGGGTCGCCAGCTTCTCGCCACC GCCCTCACCGAACAGGTGCTCGGCGTGGCCGCAGTTGGAGCAGATGTGCACGGCCATGTTTTCCACCACGCCCAGCACCGGGATGTTGACCTTGCGGAAC ATCTCCACGCCCTTGCGCGCGTCCAGCAACGCCAGGTCCTGCGGGGTGGTAACGATGACCGCGCCGGCCACCGGGACCTTCTGCGCCAGGGTCAGCTGGA
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| Amino Acid Sequence |
>3-ketoacyl-ACP reductase
MQLNDKVIIITGGCQGLGRSMAEYFVSKGARLALVDLNQEKLDQAVAACQAAGVEARAYLCNVANEEQVEHMVAQVAEDFGAIHGLINNAGILRDGLLLK VKDGEMSKMSLAQWQSVIDVNLTGVFLCTREVAAKMIELKTSGAIINISSISRAGNIGQTNYSAAKAGVAAATVTWAKELARYGIRVAGIAPGFIETEMT LGMKPEALEKMTSGIPLKRMGKPEEIAHSAAYIFENDYYTGRILELDGGLRV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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