Pseudomonas chlororaphis HT66, M217_RS0110810

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000023, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGGTCCTGGCATCAACACCGAACCCTTCTGGGGCAAGGATGGTTCGACCATCTACTTCACCTCGGACCGTGGCGGCAAACCACAGATCTACAAGACCAGC GCGGGTGGTGGCGGTGCGGAACGGGTGACTTTCGTGGGCAACTACAACGCCAACCCGAAACTGTCCGCGGATGAAAAAACGCTGGTCATGATTCACCGGC AGGATGGCTTCACAAACTTCAAGGTAGCTGCCCAGGATTTGCAGCGTGGCAACGTAAAAATCCTTACAGACAGCACACTTGATGAGTCGCCTACTGTTGC GCCCAACGGCACCATGGTAATCTACGCCACCCGCCAGCAGGGCCGGGGAGTCTTGATGCTCGTGTCCATTAATGGACGCGTGAGGCTCCCGCTTCCTACC GCTCAAGGCGAAGTCAGAGAACCGTCCTGGTCCCCTTACCTGAACTGACGCGGCGCTTTACGTTTTACTTAACACACTGGGGTTCATTAGGAGTTTCACG
DNA Sequence for Gene
>M217_RS0110810
ATGGAAATGCTGAAGTTTGGTAAGTTTGCTGCGCTGGCTCTGGCCATGGCTGTAGCTGTAGGTTGCTCCTCCAAAGGCGGCGACAACGCTGGTGAAGGCG CTGTTGATCCAAACGCTGGTTACGGCGCTAACACCGGTGCAGTTGACGGCTCCCTGAGCGAAGAAGCTGCTCTGCGCGCAATCACCACCTTCTACTTCGA ATACGACAGCTCGGACCTGAAGCCAGAAGCCATGCGCGCTCTGGACGTTCACGCCAAAGACCTGAAAGCAAACGGCGCTCGCGTTGTTCTGGAAGGCAAC ACCGACGAACGTGGTACTCGTGAGTACAACATGGCTCTGGGCGAGCGTCGTGCGAAAGCCGTTCAGCGCTACCTGGTGCTGCAAGGCGTTTCCCCAGCTC AGCTGGAACTGGTTTCCTACGGCGAAGAGCGTCCAGTTGCTACCGGCAACGACGAGCAGTCCTGGGCTCAAAACCGTCGCGTCGAACTGCGTAAGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TTCGTCATGCGAACGTGCCGTCGTGCTCTAACTGTCTTGGCTCTCAGCCTCGCGCCGCTTTCGGTGTGGGCTGCGGTTCCTGTGGTCGATAACAACTCAG GCTATAACAATAGCGGAGGCAGTTATCCGCCAGCGGGTTATGGCACGAACGGCGCCTATGCCGGGGGAGGGGTTTCGACCCCTGTCTCGGCACAGGGCGA GCTGTTCCAGCAACTGCAGCAAATGCAGGAGCAAATCGCACGGCAACAAGGTGTGATTGAAGTACTGCAAAACGATGTTGCGCGCATGAAGCAGGAAAGC CTGGAGCGTTACCAGGATCTTGATCGGCGCATTGGAGCGGGCGGTGCACCTGCCGCGACTCCTGATAATTCTTCTGCCGGTGGCGATGCAAGTGCCGCCG GTGCAGCTGCCGGGGCTGCCTCGCAGGCTCCAGCGGCAAGCAGTGAACCGGGCGATCCGGCGAAGGAAAAGCTGTATTACGACGCAGCCTTCGACCTGAT
Amino Acid Sequence
>peptidoglycan-binding protein
MEMLKFGKFAALALAMAVAVGCSSKGGDNAGEGAVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKANGARVVLEGN TDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQSWAQNRRVELRK
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site