Pseudomonas chlororaphis HT66, M217_RS0110165

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000023, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCTGATGTTGATGCGCTCGTCGATGTTCTGCTCCAGCAGCAACTGGATCAGCTCGCGCTTGAGCACCATGACCTGGCCCTCGGCGGTGGCCCAGACGAA TTCGCTGGCGGGGGTGATGGCGTCGTCGGCGACGTCCATGCCGAAGGAGTCTTCGCTGAAGCGCACGATGTGCTGGCCGCTCTTGCGGTTGAAACCGACA AAACCCTTGAGCTGGTCGGCGGCCTGGCAGATGAGTTCGGATGTGATGCGCATGGTAAACCTCACTGAGTGTCCCGCAGGACAGGTGATCGATGGTTTAC ACGCCAGGCAAGAGTGGAAATCTCGGGCTTCCCTCTGACGGGGAAACTTCAGGGCGCAAGCGTACTGCAAAGCACCCCACAAAAGCGTCGGAAAATTTGC CGCATGTGCAGATTTATGTCGGTTTCGCGATAGCACAACGGCCATTCAATTGTTAAAAGGTAGTCCTTTGAAAACCGCCCTCCACGAAAGGACCTCGACC
DNA Sequence for Gene
>M217_RS0110165
ATGCCTGCCACCTTCACCAAAAGCGCCCTGATGCTGAGCCTGATGCTTGGCCTGGGCCAGGCACAGGCCGCCAGCCCAAGCCCCACCGCACTGGCTGTCA GCCAAGGCATTCCACACCCCGCGGTGATCGCTCACCGGGGCGCGTCCTTCGATGCACCTGAGTCCACCGCCGCCGCCTACAAGCTGGCCCGCGACCTGGG CGCCGACTACCTGGAAATGGACTTGCAACGCAGCAAGGACGGCGTGCTGTTCGCCCTGCATGACAACAACCTGCAGCGCACCACCGACGTCGCCAGCAAG TTCCCCGAGCGCAAGGACAGCCCGGCCAACGCCTTCACCATGGCCGAACTGAAAACCCTCGACGCCGGCAGCTGGTTCAACCAGGCCCATCCCGACCGCG CCCGTGCGAGCTACGTCGGCCTGAAGATCCTGACCCTCGACGAAATCATCGACATCGCCCAGAGCAACCCGCAGCACAAGCCCGGCCTGTACATCGAGAC CAAGGAGCCCAAGCAGTTCCCCGGCATCGAGCACGACCTCAAGGAAAAACTCCAGGACCGCGGCTGGCTCAGCCCGGCCGGCTCCAAGCTGGCGAAAAGC GACCTGGCGGTAGGCCAGGGCAAAGGCAAGGTGGTGTTGCAGACCTTCGAGAAGAGCAGCCTGGAACTGCTGCAGAAAGAAATGCCCAAGGTGCCGAAGA TCCTCCTGCTGTGGATCGGTGAAGGCGGCATGCAGCCCAAGTCCGACGTGACCTTCGCCAACAGCGGCGAGAAGGACAAGGCGGCCTACTACGCCAAGCA GGAACCCAAGGACAAGGCCGAGTTCGAGCAGTGGGTCAGCTACGCCAAGGCCCAGGGCGCCATCGGCACCGGTCCGTCGGCGGCACTGACCAACGGCGGC GACCAGAGCTACTTCGACCTGGTGCAACCCTGGATGAACCAGTTCACCCACGACCAGGGCCTGCTGGTGCACGTCTACACCATCGACGAGCCGGTGGACT TCAAGAAGGTCCTGGACTCCGGTGTCGACGGCATCTTCACCAACCGCGCCTCGGAGCTGCTCAAGTACGTCAAGCGTCCGGCCAGCGGCAGCGTGAGCCA GCTGCTCGAGGCCAACGGCTACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGGTCGCCGTGCGCACGCCCGAGTGGACAGGCCAGCTGTGGCTCGGGCGTGACTACGGACTGATCCAGGGAGAGCTGGGGCGCACCGCGCCCCACGCC CACTACGCCCATCAACTGATCCTCGCCCCCGCTGCGCCGGTCACCGTCAGCCTCGACGGCCAGCCCTGCACTGCCCGACAGCTCTTCATCCCGGCCATGC AACGGCATGCCATCCTCGATGCGCCCGAGCCCCTGTTCACCCTCTACGCCGAACCGCTGACGATTGACGCCCAGGCCCTGCAAGACAGCCTGCTGGGTGT CGAGCTGACGCTGCCGGCGCTGACCGAAGCGCTGCAGCGTTGCCCGCGCCGAATCCTCCAGGACCGGCGGATCGAAAAGGCCTTGGCCGCCCTCGACCGA CAATTGGCCGGCAAGGTTTCGGCCAGCGCCCTGGCGGCCCATGCGCACCTGTCCCTGAGCCAGCTCGAACGGCTGTTCAGTGGCCAGCTCGGCTTGCCGG
Amino Acid Sequence
>glycerophosphodiester phosphodiesterase
MPATFTKSALMLSLMLGLGQAQAASPSPTALAVSQGIPHPAVIAHRGASFDAPESTAAAYKLARDLGADYLEMDLQRSKDGVLFALHDNNLQRTTDVASK FPERKDSPANAFTMAELKTLDAGSWFNQAHPDRARASYVGLKILTLDEIIDIAQSNPQHKPGLYIETKEPKQFPGIEHDLKEKLQDRGWLSPAGSKLAKS DLAVGQGKGKVVLQTFEKSSLELLQKEMPKVPKILLLWIGEGGMQPKSDVTFANSGEKDKAAYYAKQEPKDKAEFEQWVSYAKAQGAIGTGPSAALTNGG DQSYFDLVQPWMNQFTHDQGLLVHVYTIDEPVDFKKVLDSGVDGIFTNRASELLKYVKRPASGSVSQLLEANGY
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site