Pseudomonas chlororaphis HT66, M217_RS0109830

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000023, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCCCTGCTGCGGCCTGCGTGAGGTTTACCTGCTTCATACACAATTTACGCACAACCTTATCCACAGGCTGTACGTTGCAATCACCCCCAAAAACGCATT ATCTTGTAGCTCGGCTGCAAAAAAACCCTACATCTAGGGTTTCAGGCCAAAAACCAAACACAAATCAGACAAGAAACTCAAGCGCTTTTCTTGCACTCGT TTGGTGGAACCAATCGGATTTTCAGAAGCCAAACCGCGCGTGCGGATGGCTGCGGTTTTCCAGCCCACGGCAAGGAAAACGGTACGGGTGTTGCAGTACA TGACTGTCACCCACCAGGAATACGGTCACGAGCCACTGGCTCGCGACCTATGACTTCGGCATGGAAGCGGCGCCAACAGCCCCCCTTCCTGAACTGTCCC GAAGTCGTTATGCCCGGCGTGCGCCGGTTGTAGTGCTTCAGGACGGAACGGTGGGCACCCAAAGGGTGCCCAAACAAACATAGAGAACGTGGAGACACCC
DNA Sequence for Gene
>M217_RS0109830
ATGCAAACCGACACAACTCGCGAGAACCCGCAGGCCAAAGCGCCGCAGGCTGCCGATTCCAACCTGGATCTGTCTGCCACCGCGCCTGGCCAACTGCGAG TGATCAAGCGTAACGGCACTGTCGTTCCTTATACCGATGACAAAATCACCGTCGCCATCACCAAAGCGTTTCTCGCAGTTGAAGGCGGCACCGCTGCCGC TTCGTCGCGAATCCACGACACCGTCGCCCGCCTGACCGAACAGGTCACCGCCACCTTCAAGCGTCGCATGCCTTCGGGCGGCACCATCCACATCGAAGAG ATCCAGGACCAGGTCGAACTGGCCCTGATGCGTGCCGGCGAGCAGAAAGTTGCCCGCGACTACGTGATCTACCGTGACTCGCGCGCCAAGGAGCGTGCCA CCCGCACGCCAAGCGAAGAGCCGGTGCAGGCTCACCCGTCGATCCGTATCACCCGCACCGACGGCAGCTTCGCGCCTCTGGACATGGGCCGCCTGAACAC CATCGTCACCGAAGCCTGCGAAGGCCTGGAAGAAGTCGACGGCGACCTGATCCAGCGCGAAACCCTGAAGAACCTCTATGACGGCGTAGCGCTCAAGGAC GTCAACACCGCCCTGGTGATGACCGCGCGCACCCTGGTAGAGCGCGAGCCGAACTACTCGTTCGTGACCGCCCGCCTGCTGATGGACACCCTGCGCGCCG AAGGCCTGAGCTTCCTGGAAGTGGCCGAGAGCGCCACTCACCACGAGATGGCCGACCTGTACGCCAAGGCGCTGCCGGCCTACGTCGCCAAAGGTATCGA GTTCGAACTGCTGAACCCTGTGCTGGCTGACTTCGACCTGGAAAAACTCGGCAAGGCGATCAACCACGAGCGCGACCAGCAGTTCACCTACCTGGGCCTG CAGACCCTGTACGACCGCTACTTCATCCACAAGGACGGCGTGCGCTTCGAACTGCCGCAGATCTTCTTCATGCGCGTGGCCATGGGCCTGGCGATCGAAG AGAAGCAGAAAGAAGACCGTGCCATCGAGTTCTACAACCTGCTGTCGTCCTTCGACTACATGGCCTCGACCCCGACCCTGTTCAACGCCGGCACCCTGCG CCCACAGCTGTCGAGCTGCTACCTGACCACCGTGCCGGACGACCTGTCGGGCATCTACGGCGCCATCCACGACAACGCCATGCTGTCGAAATTCGCCGGC GGCCTGGGCAACGACTGGACTCCGGTGCGTGCGCTGGGTTCCTACATCAAGGGCACCAACGGTAAATCCCAGGGCGTCGTGCCCTTCCTGAAAGTGGTGA ACGACACCGCCGTAGCCGTGAACCAGGGTGGCAAGCGCAAAGGCGCTGTATGTGCCTACCTGGAAACCTGGCACATGGACATCGAAGAGTTCATCGAGCT GCGCAAGAACACCGGTGACGATCGTCGTCGTACCCACGACATGAACACCGCCAACTGGATCCCTGACCTGTTCATGAAGCGCGTCTTCGACGACGGCAAG TGGACCCTGTTCTCGCCATCGGAAGTGCCGGACCTGCACGACCTGACCGGCAAGGCCTTCGAAGAGCGCTACGAGTACTACGAAGCCCTGTGCGAATACG GCAAGATCAAGCTGTTCAAGACCATCCAGGCCAAAGACCTGTGGCGCAAGATGCTGTCCATGCTGTTCGAAACCGGCCACCCTTGGCTGACCTTCAAGGA CCCGTGCAACCTGCGCAGCCCGCAGCAGCACGTGGGCGTGGTCCACAGCTCGAACCTGTGCACCGAGATCACCTTGAACACCAACAAGGACGAGATCGCC GTTTGCAACCTGGGCTCGATCAACCTGCCGAACCACATCGTCGACGGCAAGCTGGACACCGCCAAGCTGCAACGCACCGTGAACACCGCCGTGCGCATGC TCGATAACGTGATCGACATCAACTACTACTCGGTACCACAGGCGAAGAACTCCAACTTCAAGCACCGTCCGGTCGGACTGGGCATCATGGGCTTCCAGGA CGCGCTGTACCTGCAGCACATCCCTTACGGTTCCGACGCCGCCGTCGACTTCGCCGACAAGTCCATGGAAGCGGTGAGCTTCTACGCGATCCAGGCTTCC TGCGACCTGGCCGACGAGCGTGGCGCCTACGAGACGTTCCAGGGTTCGCTGTGGTCCAAAGGCATCCTGCCGCTGGATTCGCAACAGATCCTGATCGAAT CCCGTGGCCAGAAGTACATCGACGTCGACCTGAACGAAACCCTGGACTGGGCACCGGTGCGCGCCCGTGTACAGAAAGGTATTCGTAACTCCAACATCAT GGCCATCGCTCCGACCGCGACCATCGCCAACATCACCGGCGTGTCGCAGTCGATCGAACCGACCTACCAGAACCTGTATGTGAAATCGAACCTGTCGGGC GAATTCACCGTGATCAACCCGTACCTGGTTCGCGACCTCAAGGCCCGCGGCCTGTGGGACTCGGTCATGATCAACGACCTGAAGTACTACGACGGTTCCG TGCAGCAGATCGAGCGCATCCCGCAAGAACTCAAAGAGCTCTACGCGACCGCCTTCGAAGTGGAAACCAAGTGGATCGTCGACGCCGCCAGCCGTCGCCA GAAGTGGATCGACCAGGCTCAGTCGCTGAACCTCTACATCGCCGGCGCTTCGGGCAAGAAGCTCGACGTGACCTACCGCATGGCCTGGTACCGTGGCCTG AAAACCACTTACTACCTCCGTGCCCTGGCCGCGACCAGCACCGAGAAGTCGACCATCAACACCGGCAAGCTGAACGCTGTTTCCAGCGGCGGCAACCACG GTGACGACTCGGTCCTGGCGGCTCCAGCCGGTCCTGCTCCAGTGCCGAAGGCTTGCGCCATCGACGAGCCGGATTGCGAAGCTTGCCAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCTGAGCCGATAGGCGTCTTCCGGCGCTTATCCGAACCCCCGACAGGCCCCCGGCCTGCCGGGGGTTTTCTTTTGCCCGGGAAAAGCCACAGCACCACCG AATCCAAAGGACGGCACTCGAGGACGAAGCCCTCCCACAACCTGTTGCAGGCGACTTGCCAGAAGCTCCCATCGTCAGTTTCGCGGAAATGAACCAGTCG AATACAGCCCTTCAGGCCGAGTATCCGCGGCAGGACCGATACGCCTCCTCCGCATGCCATCCCTCATCGCGAGCAAGCTTCGTTCCTACAGAAGCGGGCC GTGGTCGATGGACCCTGCAGGCACAAAAAAGCCCCTGCGGTGAGGGGCTTTTTTTTAGCGCTGTCAGCCAGCCATTATCAGGTCATCTGAATAATGGTCT GCATGATGGTGCTCTGGGTGGAGATGGTCTTGGCGTTCGCCTGGTAGTTGCTCTGGGCCTTGATCAGGTCCACCAGCTCGTTGGTCAGGTTGACGTTCGA
Amino Acid Sequence
>ribonucleotide-diphosphate reductase subunit alpha
MQTDTTRENPQAKAPQAADSNLDLSATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGTAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEE IQDQVELALMRAGEQKVARDYVIYRDSRAKERATRTPSEEPVQAHPSIRITRTDGSFAPLDMGRLNTIVTEACEGLEEVDGDLIQRETLKNLYDGVALKD VNTALVMTARTLVEREPNYSFVTARLLMDTLRAEGLSFLEVAESATHHEMADLYAKALPAYVAKGIEFELLNPVLADFDLEKLGKAINHERDQQFTYLGL QTLYDRYFIHKDGVRFELPQIFFMRVAMGLAIEEKQKEDRAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLSGIYGAIHDNAMLSKFAG GLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHMDIEEFIELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGK WTLFSPSEVPDLHDLTGKAFEERYEYYEALCEYGKIKLFKTIQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIA VCNLGSINLPNHIVDGKLDTAKLQRTVNTAVRMLDNVIDINYYSVPQAKNSNFKHRPVGLGIMGFQDALYLQHIPYGSDAAVDFADKSMEAVSFYAIQAS CDLADERGAYETFQGSLWSKGILPLDSQQILIESRGQKYIDVDLNETLDWAPVRARVQKGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSG EFTVINPYLVRDLKARGLWDSVMINDLKYYDGSVQQIERIPQELKELYATAFEVETKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGL KTTYYLRALAATSTEKSTINTGKLNAVSSGGNHGDDSVLAAPAGPAPVPKACAIDEPDCEACQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site