Pseudomonas chlororaphis HT66, M217_RS0109605

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000023, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GTTGGCCTGATGCAGCCCTGGCGTTTCATCCGTATCAGCGACCGGCCCTTGCGCGGGCAGATCCAGCAACTGGTGGAAGAGGAGCGGGTGCGCACCGCCG AGGCCCTGGGCGAGCGCTCCGATGAGTTCATGAAGCTCAAGGTCGAAGGCATCAACGACTGCGCCGAGGTCCTGGTGGCGGCGCTGATGGACGACCGTGA GCGGCATATCTTTGGCCGGCGCACCTTGCCGGAAATGGATCTGGCTTCGCTTTCCTGCGCGATTCAGAACCTGTGGCTGGCGGCCCGGGCCGAAGGGTTG GGCATGGGCTGGGTGTCGCTGTTCGAGCCCGCTGCCCTGGCCGAGTTGCTTGGCCTGCCGGCCGGGGCCAAGCCACTGGCGGTGCTGTGCCTGGGGCCGG TGGGCGAGTTTTACCCGGCGCCGATGCTGGTGCTCGAAGGCTGGGCGCGGGAGCGTCCGCTGAGTGAATTGCTGTATGAAAACTATTGGGGAGTGAGTCA
DNA Sequence for Gene
>M217_RS0109605
ATGAGTGTGGCGTTGCTGAGTGTCGCCGGGGTAGCGCTGGACGCGTTGCTGGGCGAACCCAAACGCTGGCATCCGCTGGTGGCGTTCGGCCGTTTTGCCG ATCGCATCGAGCAACGTTTCAACTCCGGCGGTCGCGGCTGGCGCAGTCATGGCGTCACTGCCTGGGTCATTGCGGTGCTGCCGCTGACCCTGCTGGCAAC GCTGTTTTCCTGGCTGCCCTATATCGGCTGGCTGTTCGAGATCCTGGCGCTGTATTGCGCCCTCGGTCTGCGCAGCCTCGGCGAGCATGTCGAGCCAGTG GCCCAGGCCTTGCGCAGCGACGACCTGGATCAGGCGCGGCAGCGGGTCGGTTATCTGGTCAGTCGCCAGACCAGCGAACTGGATGCCACCGAAGTCGCCC GCGCCGCCACCGAGTCGGTGCTGGAGAACGGCAGCGACGCGGTGTTCGCCGCCTTGTTCTGGTTTGCCGTGGCCGGCGCGCCGGGCGTGGTGCTCTATCG TCTGAGCAACACCCTGGATGCGATGTGGGGCTATCGTAATGAACGTTTCGAGCGTTTCGGCTGGGCGGCGGCGAAGATCGACGACCTGCTCAACTATGTT CCGGCCCGTCTGGTGGCCCTGACTTACGCGTTGCTGGGCAAGACCCGCCTGGCGCTGAAATGCTGGCGCCGCCAGGGGCCGACCTGGGACAGCCCGAACG CCGGGCCGGTGATGGCGGCCGGGGCCGGGGCCCTGGGTGTCGAGCTGGGCGGCGCGGCGATCTATCACGGCGAGCTGCACCAGCGGCCGCAGCTGGGCGA GGGCGTGGCGGCCGATGCTTCGTCCATCGATCGCGGCTGGCAACTGGTACAGCGTGGGGTCTGGTTATGGCTGCTGATTCTCTGCGTGGGAGCTGAGTTC TATGCTTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCACGGTGGCCGCCTGCGCAAGGCGGCCGATCAATACGGCATCGCCGAGGCCGACTGGCTGGACCTGTCCAGCGGCCTGGCGCCCTGGCCGTGGCCGATT CCCGAGATCGGCATGCGGGCCTGGGCGCGCCTGCCGGAAACCGACGATGGCCTGGAGCAGGCCGCCCGCGACTACTACGGTGCCGCCCATGTGTTGCCGG TGCCCGGCTCCCAGGCGGCGATCCAGCTGCTCCCGCGTTTGCGCCGCGCCGGCAAGGTCGGCGTGCTGTCGCCCTGTTATGCCGAACACGCCGAAGCCTG GCGCCGCAGCGGCTACATCGTGCGTGAGGTGCTGGAGCAGGAAGTGGACTTTTTCCTCGACAGCCTGGACGTGCTGGTGGTGGTCAACCCGAACAACCCC ACGGGCCTGAGCCTGACCCCGGAGCGCCTGCTGGACTGGCACGCGCGCCTGGCGCAGCGCGGTGGCTGGCTGGTGGTCGACGAAGCCTTCATGGACAACA
Amino Acid Sequence
>cobalamin biosynthesis protein CobD
MSVALLSVAGVALDALLGEPKRWHPLVAFGRFADRIEQRFNSGGRGWRSHGVTAWVIAVLPLTLLATLFSWLPYIGWLFEILALYCALGLRSLGEHVEPV AQALRSDDLDQARQRVGYLVSRQTSELDATEVARAATESVLENGSDAVFAALFWFAVAGAPGVVLYRLSNTLDAMWGYRNERFERFGWAAAKIDDLLNYV PARLVALTYALLGKTRLALKCWRRQGPTWDSPNAGPVMAAGAGALGVELGGAAIYHGELHQRPQLGEGVAADASSIDRGWQLVQRGVWLWLLILCVGAEF YA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site