Pseudomonas chlororaphis HT66, M217_RS0109025

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000022, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCGGAAAAACAGCTGATACCGCCTTTGAGCTGTTCGGCGATGGCCAGGTCGGTACCGTCGCGGACAAAGGCTTCATCGACCCATTTGGCTTCGGCGGGCC AGATGTGGTTTTCCAGCCAGGTCATCAGTGGCAGATCGTCGGCCAGGCCGCGGAACAGGGTCATCGCCGCGTGACCGTGGGCATTGATCAGGCCGGGGCT GAGCAGCATGCCGGGCAGTTCGCGGACCTCGGCAGCCTGCAGTTTCAAGGCGTTGGCACGCGGACCGATGAACACGATGCGCCCGTCGCGGATACCCAGG CCGTGCTCCTTGAGCACCACGCCGGCCGGTTCAACAGGTACCAGCCAGGTCGGCAACAGGAGTAGGTCGAGCGCAACGACAGGGTTCGGCATCGAAGATC GGTTCCAGGGCGTTTGTAGAGGATGGCGAAGTATACCCGAGCGTCTTCGCCGGGGGATCGCTATAATCGGCGGCTTTTGTTCATGAGTGCGGGGTGAGGG
DNA Sequence for Gene
>M217_RS0109025
ATGCGCGACCGACTGTTGGCTGCGGAGAAGGTGAAGGCCATCGATTGGCGGGATGACGCCCTGTATCTGCTCGATCAGCGTATTTTGCCCTTCGAAGAAA GCTGGATCGCCTACACCAGTGCGGCCGGCGTCGCAGAGGCCATTCGCGAAATGGTGGTGCGTGGTGCGCCGGCGATCGGCATCAGCGCCGCTTATGGCGT GGTCCTGGCGGCGCGCGCGCGTTTTGCCGCCGGTGGCGACTGGCAGGCTGCGATGGAGGAAGACTTCGCGCTGCTCGCCGATTCGCGCCCAACCGCGGTC AACCTGTTCTGGGCGCTGAACCGCATGCGTGAACGCCTGGAGCGCCTCAAGGGCCACGCCGACCCGTTGGCGCTGCTGGAAGCGGAAGCCCTGGCCATTC ATGAAAGCGATCGCGAAGCCAACCTGACCATGGCCCAACTGGGTGTCGACCTGATTCGCAGGCATCAGGGCAATGCCCAGGCCATCCTGACCCACTGCAA CACCGGCGCCCTGGCGACCGGCGGTTTCGGCACGGCCCTGGGGGTGATTCGCGGGGCCTTTATCGAGGGCATGGTCGAACGGGTGTATGCCAATGAGACC CGTCCCTGGCTGCAAGGCTCGCGGCTGACCGCCTGGGAGCTGGCCAACGAAGGCATCCCGGTGACCTTGAATGCCGACTCCGCTGCCGCGCATATCATGA AAACCAAAGGCGTGACCTGGGTGATTGTCGGCGCCGACCGCATTACCGCCAACGGTGACGTGGCGAACAAGATCGGCACCTATCAGCTGGCGGTCAATGC GATGCACCACGGCGTGCGTTTCATGGTGGTCGCGCCGAGTTCGACCATCGACATGGCCCTGGCCAGCGGCGACGACATTCCGATCGAGGAGCGTGATGGC AAGGAGCTGCTCGAGCTCGGCGGCAAGCGGGTAGGGGCTGATGTGGAGGCCTACAACCCGGTATTCGACGTCACCCCTGCGGACCTGATCGACGCCATCG TCACCGAGAAAGGCATAGTCGAGCGTCCCGACACCGCGAAAATGACCCAATTGATGTGCCGCAAGCGCCTGCACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AGTCATTTTGCAAAAAAAATCTCTGACGGCTGCCGTGGGGTGGTCGTCAGTCCGGAAAAAATCCGCATTTATGGGCGAAATCCGCCTCTGAGCTTCTCTC GTCTCTTATCAGCCTGTCACCGGTCAACTAACTATGCTCCATGCGCATCAGGGGGATAGGTGCGTGGCGGCGATTGTGATAACATCCGGCGGTTTCCAAG GTGGTCCGAAGTGACCGCCTTCACTGCGCAAATCCATGGCATAACTTGTTGATTTGTCGTAAGTCGGTGCATGGCACTAGGCCTGCAGCGGCGAGCTTCG TTCGTCCCATATGGATGTGACGAAGTTTCACCAGAAAAAGGAATCAGGCTTCTCATGGGCGAACTGGCCAAAGAAATCCTCCCGGTCAATATCGAAGACG AGCTGAAACAGTCCTATCTCGACTACGCGATGAGCGTAATCGTCGGGCGGGCACTGCCTGATGCGCGCGATGGCTTGAAGCCCGTGCACCGGCGTGTGCT
Amino Acid Sequence
>methylthioribose-1-phosphate isomerase
MRDRLLAAEKVKAIDWRDDALYLLDQRILPFEESWIAYTSAAGVAEAIREMVVRGAPAIGISAAYGVVLAARARFAAGGDWQAAMEEDFALLADSRPTAV NLFWALNRMRERLERLKGHADPLALLEAEALAIHESDREANLTMAQLGVDLIRRHQGNAQAILTHCNTGALATGGFGTALGVIRGAFIEGMVERVYANET RPWLQGSRLTAWELANEGIPVTLNADSAAAHIMKTKGVTWVIVGADRITANGDVANKIGTYQLAVNAMHHGVRFMVVAPSSTIDMALASGDDIPIEERDG KELLELGGKRVGADVEAYNPVFDVTPADLIDAIVTEKGIVERPDTAKMTQLMCRKRLH
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site