Pseudomonas chlororaphis HT66, M217_RS0108795
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis HT66 contig000022, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CCTCCACGAACGCGACGCCAGCCAGCGCCTGCTGGAAATCGTCCGCGACTTTCGTGATCGCTTGCCGGCCGCCGTGGTGCATTGCTTTACCGGCGAACAG CGCGCGCTGTTCAACTACCTGGACCTCGACTTGCACATTGGCATCACCGGGTGGATCTGCGACGAACGCCGCGGCACTCACTTGCACCCTCTGGTGCGAG AGATTCCCCGCGGTCGCCTGATGCTGGAAAGCGACGCCCCCTATCTGTTGCCCCGCAGCCTGCGCCCCAAGCCGAAGAACGGTCGTAACGAACCGGCCTA CCTGACCGAAGTGTTGCGCGAGGTCGCCCTGCATCGCGGCGAAAGCCAGGAAGAGCTGGCGGCCCATAGTACCGCCAGCGCCCGTGCCTTTTTCGACTTG CCCGGGATTGCTTGACGCATATCAAGATTTAACCCTCTGCATAGCGGCACAATAATGGCACCTTGCCAATACTGTTCCGCTTAATCAGAGAAGACCTTCC
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| DNA Sequence for Gene |
>M217_RS0108795
ATGGGTGCCTGGCTCAGCAATATCTCACTGAAATACAAGTTCTGGGCGGTCAATGCAGTCGCCTTCGTGACCACCCTTCTATTGGTCCTGTACGCCGTCC AGCTGGAGCAACAAGCGCGTAGCCAGGCCTCACAAAGCAACGCCAGAGTCCAAGCGAACCTGCTCGGCGCCTGGCCCTCCGGGCAAATGCTGCCCAACGC CGAGAATCTGCTGAGCTTCGCTGCCGGCCAGATCCCCAGCCTCGATCAACGCCCCTTGCCAGAATTGAGCAACGCCAACGGATGGGTGGCGTTCGACGAG ATGCCACTGTTCGGCGAAAACCCGCTGATCGGTGCGCAGGTGCTATCCCGGACCGACGGCCAACGAGTTGCGGTGCTTGCCTATGGGCCGAGCCTGCGCC AGGTGTTCAGCGAGCGCTTCAACCAATACGCGGTGGCCGTGTTCATTCTGATGCTGGCGATGCTCGGTGCTTCGCAACTATTGATCCGTTTCCTGCTCAG CCAGCTGAACACCCTCAAGGATGTGATGCTGCATGTGGAGAAGACCGGCGATCTGTCGGCTCGCGTGCCCCTGTCATGCACTGACGAGGTAGGCCAGATG GCCAGCGCCTTCAACGCGATGCAGGCCGGTTACCAGCGGGTGGTCAACACCGTCGCCAACACCGCCCGACAACTGGATATCGGCGCCGCGCGCCTGGCGT CGAGCATGAACGACGTGCGTCACGGCATGCTGGGCCAGCAAAGCGAAACCGATCAGGCCGCGACAGCAATCAACGAAATGTCCGCCACCGTCTATCACAT CGCCCAGCACGCCGGCGCCACCCGGGATCGCTCCCAGACCGCCGATGCCCTCGCCGGCAGCGGCCAGGAAGTGGTGGGTCGCGTGCAGAAATCCATCTCC GGGCTCTCCACCGGTGTGCAACAGACTGCCGAGATGATCCAGCGCCTGGCCGAGGACAGCCAGAAGATCAATGGCGTGGTCAACGTGATCCACAGCATTG CCGAACAGACCAACCTGCTGGCGCTCAATGCTGCGATCGAAGCCGCGCGCGCCGGCGAAATGGGCCGGGGGTTCGCGGTGGTCGCAGATGAAGTACGCAA CCTCGCCAAACGGGTGCAGACCTCCACCGACGAAATCACCCGGATGGTCTCCGCCCTGCAGGCCGGTACCCGCGACGCAGTGGACTTTATGCAGGAAAGC TCGTTCAAGGCGGACGATTGCGTGCAGCAGGCACAAGAAGCCGGCGCAGCGCTGGCGGAAATCACCGCGGCTGTGGCGCAGATGCGTGAAAGCAATACCC AGATTGCAGTGGCGGCCGAGCAGCAAAGCCAGGTGGCAGAGGAAATGAATCGCGCCGTGGTGAGTATTCGCGACGTCACCGAAAACACCGTGCAACAGAC CGTCGACTCGGCGACCACCAGCAACGAGCTGGCGACCTTGGCCGGAGAGTTGAGCAAGGCCATCGGCCAGCTGAAGCTTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCGCGAGTTTCGCTCCTGCGGGAATCGGCCTGCCTGCCGGAGCGAAACCCTGGCCAGCCTATCGCCCCCATAGCCAGCCTTGATTCGCCGAAGACCCGC GCGGGACCTATCCTTGATACATAGGTTTCTACGAATCAAGGATCACCGTCATGGGTAAACGTCACCCCAACCTCCCCGCCTGGCAATGGCGCTCCTACCC GCACAACCACCGCAACCCGACCAACCTGGTGTTGCACTTGATTGCGGTGCCGCTGTTCATCGTCGGTTTTCTGTTGCTGGTTTCAGGGGTATTCGGCTTG AGCTTCACCAACGTCGCCATCGGCGTGGTCGGCCTGATTGCGGCCTTGGGCCTGCAACGTCACGGCCACAGCCTGGAGGCGCAAGCCGCCGAGCCGTTCA GTGACCGTAAAGATGCAGTCCAGCGCCCGCTGGTGGAACAATTCGTGACCTTTCCACGCTTCGTTCTCAGCGGCGCCTGGTGGCGTGCCTGGCGCGAACG
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| Amino Acid Sequence |
>chemotaxis protein
MGAWLSNISLKYKFWAVNAVAFVTTLLLVLYAVQLEQQARSQASQSNARVQANLLGAWPSGQMLPNAENLLSFAAGQIPSLDQRPLPELSNANGWVAFDE MPLFGENPLIGAQVLSRTDGQRVAVLAYGPSLRQVFSERFNQYAVAVFILMLAMLGASQLLIRFLLSQLNTLKDVMLHVEKTGDLSARVPLSCTDEVGQM ASAFNAMQAGYQRVVNTVANTARQLDIGAARLASSMNDVRHGMLGQQSETDQAATAINEMSATVYHIAQHAGATRDRSQTADALAGSGQEVVGRVQKSIS GLSTGVQQTAEMIQRLAEDSQKINGVVNVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQTSTDEITRMVSALQAGTRDAVDFMQES SFKADDCVQQAQEAGAALAEITAAVAQMRESNTQIAVAAEQQSQVAEEMNRAVVSIRDVTENTVQQTVDSATTSNELATLAGELSKAIGQLKL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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