Pseudomonas chlororaphis HT66, M217_RS0107090 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000017, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACTTCGAGTACATCAACTCCGAAGTGAACCCGGCGATGGCCAACATCGTCGGCCCGAGCGAAGCGATCGTGGTCTCGACCTTCCACATCGAGCTCGATGG CGGTGGCGGCGACCTGCACGTGACCATGCCGTACTCGATGATCGAGCCGGTGCGGGAAATGCTCGACGCCGGCTTCCAGTCGGACCTGGACGACCAGGAC GAACGCTGGAGCAAGGCCCTGCGCGAAGACGTGCTGGACGTGGATGTGCCCTTGAGTGCCACGGTGGCCCGCCGGCAGTTGCGCCTGCGCGACATCCTGC ACATGCAGCCAGGGGATGTGATCCCGGTGGAACTGCCTGAAGACATGATCATGCGCGCCAACGGCGTACCGGCGTTCAAGGTCAAGCTCGGTTCGCACAA GGGCAACCTGGCCCTGCAAGTGATCGAGCCGATCGAGCGCCGTTGAGCGGCGCTGTTATGAATTCGCTTTGTTAATGATTTTTTGCCCGCCGAGGACAAC
DNA Sequence for Gene
>M217_RS0107090 |fliN
ATGGCTGACGAACACGAAATGACTTCCGCAGAAGACCAGGCCCTGGCTGATGAGTGGGCGGCCGCCCTGCAGGAAACCGGCGATGCCGGACAAAACGATA TCGACGCCTTGCTGGCAGCCGACGCGGCCAGCGCGCCGGCGTCCAATCGCCTGCCGATGGAAGAGTTCGGCAGTGTGCCGAAGAGCAACGAGCCGGTGAC CCTCGACGGGCCGAACCTGGACGTGATCCTGGACATCCCGGTATCGATCTCCATGGAGGTCGGCAGCACCGACATCAACATCCGCAACCTGCTGCAGCTC AACCAGGGTTCGGTGATCGAGCTCGATCGCCTGGCCGGCGAGCCGCTGGACGTGCTGGTCAATGGCACGCTGATCGCCCATGGCGAAGTGGTGGTGGTCA ACGAGAAGTTCGGCATCCGCCTGACCGACGTGATCAGCCCGAGCGAACGCATCAAGAAGCTGCGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGAGAAAGCTACTCGCGCTGTTCCTGGCCTGGCCGCTCTGGGCCCTGGCCGCCGAGCCGGCGGCCAGTACCGCCGCGCCAGTGGTTGGCAGCAGCGGCG TGGCCGGGCAGCTGACCCAGCTGGTGCTGGGCCTGTTGCTGGTGGTGGGGCTGATCTTCTTCCTCGCCTGGCTGTTGCGCCGGGTGCAGCAGGCCGGACC GGCCGGCAAGGGGCAGGTCATCGAGCTGGTCGGCTCGCGGGCGCTTGGCCCGCGGGACCGGCTGATGCTGGTGCAGGTCGGCAACGAACAGATTCTGCTC GGCCTGACGCCGGGCACCATCACTGCGTTGCATGTGCTCAAGGAGCCGGTGCAGGTGCCGAGCACCGAGCAGGCGACTCCGGAGTTTGCCCAGCGCCTGA TGGAGCTGCTGGGCAAGGATCAGAAGGATAAGAAGTAATGCCGTTGCGCCTCCTCTTGATGTTGGCCCTGATGCTGGCGGCGCCGCTGGCGCTGGCGGCC
Amino Acid Sequence
>flagellar motor switch protein
MADEHEMTSAEDQALADEWAAALQETGDAGQNDIDALLAADAASAPASNRLPMEEFGSVPKSNEPVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQL NQGSVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site