Pseudomonas chlororaphis HT66, M217_RS0105380

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000015, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
ACGAAGGCGCCCAGCGCTGCGTCGAAGACAGCCGTCAGGCCTCCGCGATGTTCCAGGCCGTCGGCGCCGACATCTCCCATATCGACCAACTCAACGGCCG CATCGTCAGCACCACCCGCGAACAATCCAGTGCCAGCCTCGACATAGTTGGCCGCCTGCACTCGGTCCAGGCCATCGCCCAGAACACCGCCGACGACATG GGCAACCTGGCCCTGAGCAGCCAGCGCCTGCCGCCGATCGCGATTCGGCTGGAGGCGTTGGGGCAGACGTTTCACAAGTAACGGGGGAGTGGCGCCTGCT TGCCGATAGGCAGCGGGCGCCATCACTGCTGCTGGTTCGCAGGCCCTGATCGGAGCCCGGACTACAGGTTATTCAGACCGGTCAACGTCAATCTCAGAGT TCTCCAAGTTTCCAGGAACCACCCGATTCGCCAAGTTAGGAGGTCTCGCACCAGGCATAGCCGGTGCGAGGTTTTCTTGGGGGAATGGGGAGCAACATGG
DNA Sequence for Gene
>M217_RS0105380
ATGAGTGGCTACGTCGCCAATAACCCGAAGGGCTATCGCAACAAGGGTATCGAACCGGTCGATCTGGGGGCCCTGCGTTGGGCTGAGTACAAGGATCTTC CAGCGAAAGCAGAAACCAAACTGGCTAACGCTGGATGCACCTTTACCAAACCCTGCAAGCTGGCTGACGGGGTTATCAACTACGCCAGCTCTTTCATCCC CACTGAGGCCGTCAAGGAGTACGGCGAGTTTGCGTTGTTGGGTGGGCATGAAACCGATGCGGCGGGAAACCTCAGGCTCGGAAGGATCAGTGGAAGTGTG CCTCCCGCGTTAGGTGGACTCATGCTCGGCGCCAGTGCGCTGGCGCCCGTTGGGGCATCGTGTGGTGGTCTTTGTGGTACGGCTGTCGGAGGTGCAAGCG GTGCCTTCGCTTCTGGCGTGGTTGCGGGAAGCCTGCTCGGTGTTATCGCCATGCTCGCACCGTCGAGCCTGGGCGATAGCGCTTTGTATACGGAGGAACA GCTCAAGTCGCTCAAAGAAGGCCGGACCCGGGTTCGACTGCATATCGAAGAGCAAGCCGATGGCTCGCTCAAGGGCTATGGGTATAACACCGAGAATCGC CGCGATTGGGAAATGATCCCCGTGGTCCGGTTTCAGGTTCGGGACCAGCAACAGGTGGCCGATTTCGGCGATGGTGTCACCCTGATCTGGACGCCAGCGG TCGACCCCTCCAGCACCTCGGGTATCCCGCCGTTAGAGGCCGCACCGCAAGCACCCCTCATCTGGATTTATCCGCCCACCGAACAGGCGGATAACATCAT CGTCAATCCGCTTTATCCGCCGGAGTACCAGGACTTCATTCTGGTGTTCCCGCCTGGTTCGGGAGTACAGCCGCTCTATATTGTGATGAATGTCCGAAAG ACTCCCGGAACCGCTTCCGGTGAGGGTGAGGACATACAGGGTGTTTGGTTGACCGGTGCGAATTCGGGGGTAGGGGTGCCGATTCCAAAAGAGGTTGCCG ATGCCTTGAGAGGGCGTGACTTCAAGAGCTTTAATGCATTCAGGGCCGCTTTTTGGAAGGCTGTTGCACGTGGGGGAGTGGCTGACCAGTTTGTCGAATA TAGCGCCAGGCGTATGCGGGCGGGTAAAGCACCACGGGTGCGAAAGGACCATCGGGTTGGGGGAAGAATCTCGTATGAACTACATCATCTAGAAAAAATA TCAGAAGGCGGTGGTGTATATGACGTCGATAACCTGAGAGTTAATACGCCACGAAACCATATCGATATTCATAGAAATGAAAAGGCCGGCCATGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CAGCATTATAAAAAACAGCTTCTCTGATTACACCGAGTCGGAATTCATCCAGCTTTTGGAAGAGTTGCTAAAAGAGGACGAAGCTGAAACAGATGAACGT GCTGACGAGCTTTTGCTGCACTTTGAAAAGGTCAGCCAGCACCCGGCAGGCTCCGACCTCATCTACTACCCCGAAGAGGGGGCAGATAACTCGCCCGAAG GCGTTACGCAAATCGTGAAAGCGTGGCGATCTGCGAACGGTTTGCCGGGCTTCAAGGCGTGATACCTCACTTGGTTGAGCACCAAACAGAATCGATAAAA AGCCCCGCCCATGCGGGGCTTTTTCATGGCCGGGAACGGGTCAGCCGGGAGGCAGGCTGGCGCGTATCTGGCTGACGCGTTGTTTCACTTCTTTCCAGGG CGCCTGGCCTGCCAGGTCCTGGCGCAGGAAGGTCAGCAGGTCGGCGATCTGCTGGTCGTCGAGGTTGTGGCGGAAGGCGGGCATGTAGCCCAGTTCCGGG
Amino Acid Sequence
>pyocin
MSGYVANNPKGYRNKGIEPVDLGALRWAEYKDLPAKAETKLANAGCTFTKPCKLADGVINYASSFIPTEAVKEYGEFALLGGHETDAAGNLRLGRISGSV PPALGGLMLGASALAPVGASCGGLCGTAVGGASGAFASGVVAGSLLGVIAMLAPSSLGDSALYTEEQLKSLKEGRTRVRLHIEEQADGSLKGYGYNTENR RDWEMIPVVRFQVRDQQQVADFGDGVTLIWTPAVDPSSTSGIPPLEAAPQAPLIWIYPPTEQADNIIVNPLYPPEYQDFILVFPPGSGVQPLYIVMNVRK TPGTASGEGEDIQGVWLTGANSGVGVPIPKEVADALRGRDFKSFNAFRAAFWKAVARGGVADQFVEYSARRMRAGKAPRVRKDHRVGGRISYELHHLEKI SEGGGVYDVDNLRVNTPRNHIDIHRNEKAGHD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site