Pseudomonas chlororaphis HT66, M217_RS0104415

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas chlororaphis HT66 contig000015, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGCGCGCCGCTGGCAGCCCTGCAGGCACGCGGCGAGGCGCTGGCGCTCTACGTCCTGGCGGAAGACCACCAGGCCCGCGGCCTGGAAGTTCCGGCCTGG GTCACCAGTGTCGACTACCCGGCGTTCGTCGCGCTGTCGATCCACTACGACAAGGTCAACAGCTGGTTATGAATGCACTGACTGTCGGCGAACGCGCCAT CGCCCTGGACAAGGACGGCTACCTGGTGGAACTGGGCGACTGGTCCAGCGAGGTGGCCGATGCCCTGGCCGCGGCGGAACAGATCGAACTGACCCCCGAG CACTGGGAAATCCTCGAGCTGCTGCGCGGCTTCTATCAAGAGTTCCAGCTGTCGCCCGCGACCCGCCCCCTGATCAAATACACCGCCTTGAAGCTGGGTC CGGACAAGGGCAACAGCCTGCACCTGAACCGACTGTTCAAAGGCACTCCCGCCAAACTTGCCGCCAAGCTGGCGGGCCTGCCCAAGCCGACCAATTGCCT
DNA Sequence for Gene
>M217_RS0104415
ATGACCGATTTCGCCACGCTGACCACCGAAACGCCCGCCGAGCATCCTTTCGCGCAGTTCGTGCGCATTCTCGGCAAAGGCAAACGCGGTGCCCGCAGCC TCACCCGTGAAGAAGCCCACGAAGCCATGGGCATGCTGCTCGACGACAAGGTCGAGGACACCCAGCTCGGCGCCTTCCTGATGCTGTTGCGGCACAAGGA AGAAAGCCCCGAGGAGCTGGCGGGCTTTACCGAAGCCCTGCGCCAGCGCCTGCAGGCGCCGCCGATCAAGGTCGACCTGGACTGGCCCAGCTATGCCGGC AAAAAGCGCCACCTGCCCTGGTTCCTGCTGGCCGCCAAGTGCCTGGCGCAAAACGGCGTGCGCATCCTGCTGCACGGCGGCGGCGCCCATACCGCCGGCC GGCTGTACACCGAGCAATTGCTGGAGCAGTTGCAGATCCCGCTGTGCCGCAACTGGCAGGCAGTCGCTACCGCGCTGGACCAGGGCAACCTGGCCTTTAT CCCCCTGGGCGACTGGGCGCCACAGCTGCAACGCATGATCGACCTGCGCAACACCCTGGGCCTGCGCTCGCCGATCCACTCCCTGGCGCGCATCCTCAAC CCGCTGGGCGCGCGCTGCGGCCTGCAAAGCATCTTCCACCCCGGCTATCAGGGCGTGCACCGCGATGCCAGTGGCCTGCTGGGGGACAACGTCATCGTGA TCAAGGGCGACGGCGGCGAAATCGAGATCAACCCGGACAGCGCCAGCCATCTGTACGGCACCACCGGCGGCGTCAGCTGGGATGAGGAGTGGCCGGCGCT GTCCGAGCAGCGCCATGTAAAACCGGCCAGCCTCGACCCCGAGCACCTGAAAGCCGTCTGGCGCGGCGATGTGCAGGACAGCTACCCGCAACTGGCGCTG ATCGCCACCATGGCCCTGGCCCTGCGCGGGCTCGGCATGTCCCGGGAACAGGCGTTCGAGCAGGCTCGGCAATACTGGGACGCTCGCGACAGATCGATTT AG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCGATCATAACCGCCCGACTTTTGCGTAATTCGTTCGAACTCCTCGGATTAGACTGCACACCAATGCACACTGACCGAGGAGTTTTTCATGGGCCTGCTG ATTGAAGGACGCTGGCACGACCAGTGGTACGAAAGCAGCAAAGACGGCGCCTTCCAGCGCGAACAGGCGCAACGCCGCAACTGGGTGACCGCCGATGGCA AGCCGGGCCCAAGCGGCGAAGGCGGCTTTCGTGCGGAAGCCGGGCGTTATCACCTGTACGTTTCCCTCGCCTGCCCCTGGGCGCACCGCACGCTGCTCCT GCGCAAGCTCAAAGGCCTGGAAAGCCTGGTCGACGTGTCTGTGGTCAGCTGGCTGATGCTGGAACAAGGCTGGACTTTCGACCGGGCCCTGGGCTCCAGC GGCGACAAACTGGATCACCTGGATTTCCTGCATCAGCGCTACACCGCCGATACCCGCGACTACACCGGCCGTGTCACCGTGCCCGTGCTCTGGGACAAAC
Amino Acid Sequence
>hypothetical protein
MTDFATLTTETPAEHPFAQFVRILGKGKRGARSLTREEAHEAMGMLLDDKVEDTQLGAFLMLLRHKEESPEELAGFTEALRQRLQAPPIKVDLDWPSYAG KKRHLPWFLLAAKCLAQNGVRILLHGGGAHTAGRLYTEQLLEQLQIPLCRNWQAVATALDQGNLAFIPLGDWAPQLQRMIDLRNTLGLRSPIHSLARILN PLGARCGLQSIFHPGYQGVHRDASGLLGDNVIVIKGDGGEIEINPDSASHLYGTTGGVSWDEEWPALSEQRHVKPASLDPEHLKAVWRGDVQDSYPQLAL IATMALALRGLGMSREQAFEQARQYWDARDRSI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site