Pseudomonas chlororaphis HT66, M217_RS0103655
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas chlororaphis HT66 contig000015, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAATGCCCTCAGGTCCTGGCGGCGCCTGCCTTAGTGTTGGCTCTGGGTCGATCCCGACCGTCACCCGAGAGGAACACCATGCCGGCGCCGACTGCCTCGC TGCTGTTTTCATCCGTCACCAGGCTGTATCGCCTGGGGCGCGTCGCGTTGTGCCTGGCGCTGGGCGGGCTGCTGGTTGCCTGTGGCGACCAGCCCGCGCC GCCCTCTACGGCCGCGGTGCAACAGCTGCCCGACGATTCGGCGTTGGCGCGGATCTACGACAGCAGCTGCAAGCTCTGCCACGCCAACCCGGCGTCCGGC GCGCCGCTGACCGGCGATGTCCAGGCCTGGCGGCCACGCATCGCCCAGGGTGCCGACACCCTGCTGGACCACAGCATCAATGGCTATAACGGCATGCCGC CGATGGGCCTGTGCATGCAGTGTTCCGAGGAGCAGTTCCTCGCCCTGATCCGCTTCATGTCCGCACAAGACCTCCAATAACCCGGCACAGGGACACAGGC
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| DNA Sequence for Gene |
>M217_RS0103655
ATGACCATGCACCTCACACGACGTCAGTTGCTGCAACGCGCAGGGGTAGCCGGAGCGTTCAGCGCCCTGGCCAGCAACCCGCTGCTGGCCGAGCTGGCGC GGGCGCCACGGCTGATTCCCTGGCGCAACTGGTCCGGCGCGCAAAGCTGCCTGCCCCTGGCGCGGCTGGCGCCCAAGGACCTCGACGAGCTGGTGCAGGT GATTCGCCAGACCCCGGGCAAGATCCGTCCGGTGGGCTCGGGGCACTCCTTCAGCGCCCTGGTGCCCACCGACGGCACGCTGCTGTCGCTGAGCTTTTTC AGCGGCCTGCTCAGCCACGATGCCGCCACCTTGCAGGCCGAGTTCGCCGCCGGCACGCCGATGTCGCGCATGGGCGCGCCGCTCAAGGCGATCGGCCAGG CCCTGCCGAACATGGCCGACATCGACTACCAGACCCTGGCCGGGGCCATCGCCACCTCGACCCACGGCACCGGCGTCGGCTTCAAGTCCTATTCGGCCCA GGTCTGTGGCCTGCAACTGGTGACCGCCAGCGGCGAGGTGCTGGACTGCGACAGCAGCCGCCACGCCGAGGTCTTCAGCGCCGCGCGGGTGTCCCTCGGT GCCCTGGGCGTCGCCACCCGGGTGCGTTTGCAGAATCGCCCGGCCTATCGCCTGCGGGAAAAACAGTGGATCGCCAAGACCGAAGAGCTGCTTGAGGACC TGGCGAAAAACACCCGCGACAACCAGCACTGGGAAATGCTGGTGGTCACCCATTCCGACTACGCGCTGTCGATTGCCCTGAATGAAACCGAAGACCCGGC GACCCCGCCGGTGGACCCGGCCGAAGAGGGCGGCAACGAGTTCGTCAGCCTGATCGAGAACCTCGACAAGTACCTCAGTGACTTTCCCGAAACCCGCCGC ACCCTGCTCAACAGCCTGCGGCATTTCGCCAGTTTCGACGACCGGGTCGGCGACTCCTACGAGGTCTACGCCAATGTGCGCAATGTGCGCTTCAACGAAA TGGAGTACTCGGTGCCGGCCGAGCATGGCCCGGCGTGCCTGCGGGAAATCCTCAAGCTGATCCGCGACAAGGACCTGCGCACCTGGTTTCCCATCGAGTA CCGCTACGTCCAGGCCGACGACATTCCCCTGAGCATGTTCGAGGGCCGCGACAGCTGTTCGATCTCGGTGCACCAGCACTACGGCATGGACCACCACAAC TTCTTCGCCGCCGTCGAACCGATTTTCTGGAAATACGCCGGCCGCCCGCACTGGGGCAAGTTGCACAGCCTCAACGCCCGGCAGTTGCAGACGCTGTATC CGCGCTGGCGCGAGTTCACCCGGGTGCGCGAGGCGCTGGACCCCGGCGGCAAGTTCCTCAATGCACACCTGTCGTCCATCCTGGGCGTGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGGGAGATAAAAAGGATGAATCGACGCAACTTCCTGCTCGGTACCGCGGGTGTCGGCGCGTTGTTGGCGGGCGTGGGCGCCTGGCTGCGGCCCGCCGACC GGGGCGGGCCCTACAGCGACTATTTCCGCGCGCTGAACCAGGAGCTCAAGGCCCACGGCCCGATGCGCCCGGTGATGCTGATCGACCTCGACCGCCTGGA CCACAACATCGACGTGGTGCTGCAGTCGGTCAAGCGCGGCGGCAAGCAGCTGCGGCTGGTGGAGAAATCCCTGCCGTCGCCGGGATTGCTGGACTATATC GGCCAGCGCGCCGGCACCCAGCGCCTGATGTCGTTCCACCAGCCGTTCCTCAATCACGACGCCCAGCGTTTTCCCGAGGCCGATATCCTGCTGGGCAAGC CGCTGCCGGTGCGCTCCGCCGAGCTGTTCTACCAGGGCCACAAAGGCCCGTTCGACCCGGCCCGGCAGTTGCAGTGGCTGATCGATACCCCGGAACACCT
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| Amino Acid Sequence |
>FAD-linked oxidoreductase
MTMHLTRRQLLQRAGVAGAFSALASNPLLAELARAPRLIPWRNWSGAQSCLPLARLAPKDLDELVQVIRQTPGKIRPVGSGHSFSALVPTDGTLLSLSFF SGLLSHDAATLQAEFAAGTPMSRMGAPLKAIGQALPNMADIDYQTLAGAIATSTHGTGVGFKSYSAQVCGLQLVTASGEVLDCDSSRHAEVFSAARVSLG ALGVATRVRLQNRPAYRLREKQWIAKTEELLEDLAKNTRDNQHWEMLVVTHSDYALSIALNETEDPATPPVDPAEEGGNEFVSLIENLDKYLSDFPETRR TLLNSLRHFASFDDRVGDSYEVYANVRNVRFNEMEYSVPAEHGPACLREILKLIRDKDLRTWFPIEYRYVQADDIPLSMFEGRDSCSISVHQHYGMDHHN FFAAVEPIFWKYAGRPHWGKLHSLNARQLQTLYPRWREFTRVREALDPGGKFLNAHLSSILGVV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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