Pseudomonas sp. URMO17WK12:I8, F639_RS0125120
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I8 F639DRAFT_scaffold00010.10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCCCTGACCTGGGTTGGGTCAAGCAGACCCTGCGCTCCACGGGTGACGTCAAGCAGTCCAACCTGATCCGCCAGCCAGACGGCAGTGTCGCCTTCCTG GTCGACTTCGCCGGCCCGGCGTTGGCCGCCCTGCCGGAAGACACCGCAGTGCGCAGCCAGATCAGCGTTGGCGACAATGCCGAAGTGGTCGAGAATAATC TGCGCTATAACCCGGAGACCAAGGGCTGGCGCCTGACCCTGCGCCTGAAGGTCAAGGAAGCCAACAAGTCCACCGAAATGCGCGCTGCGCTGGTGCGTGA CGTGCCGGTCGAGCCGGCCAAGCCTGCTGCCGAAACCAAGCAGGAAAAGGCTGCGGCCAAGCACGCCAAGCATGAGAAGACCGCCAAGGCGGAGCCAGCC AAGGCCGAACAACCTGCCGCCGATGCGGCGCCCACCAACGGGACCCCGGCCACCACTGAAAAAGTGCTGACCGAGACCTGGAGCTATCAGTTGCCTGCCG
|
|
| DNA Sequence for Gene |
>F639_RS0125120
ATGAGTAACTCAAGCGCAAGGCCAGAATCGCTTGGCGAATACCTGGCCCACCTCCCACTGAGCGATGAGCAGCGCGCGGAACTCGCCAGCTGCACGTCGT TCGGTGAGCTGCACCAACGCCTGGCGGCCAACCCGGCCGCCAATGCCACCGAGGCCGTGCAGGCTTCGGTCGGCACGCGCCTGACCGTGGGCAGCGCTGC CGAGCTGGAAGACGCCGAGATGCTCGGGGTCGACGGCAGCGGCCGCCTGTGCCTGAAGATCGCGCCGCCGATCAAGCGTACCAAGGTCGTGCCCGAGCCA TGGCGCACCAACGTACTGATCCGCCTGTGGCGGCGCATGACCGGGCGCACCAATGCCCCGCAACCACCCAAGCGCGAGCTGCCGGCGGCGCGCTGGCGCA CGGTCGGTTCGATCCGCCGCTACATCCTGCTGGCCCTGATGATTGGCCAGACCATCGTTGCCGGCTGGTACATGAAGGGCATCCTGCCGTACCAGGGCTG GTCGTTCGTCGACCTGGACGAAGTCGTCAGGCAGCCGCTGTGGGACACCGTGGTGCAGGTCTGGCCGTATGCCTTGCAGACGTCCATCCTGGTGCTGTTC GGTATCCTGTTCTGCTGGGTTTCGGCTGGTTTCTGGACCGCTTTGATGGGCTTCCTCGAGCTGCTCACCGGGCGTGACAAGTACAAGATTTCGGGTAGCA GTGCAGGCAACGAGCCGATTGCGCCCGAGGCGCGTACCGCGCTGGTGATGCCGATCTGCAACGAAGACGTGCCGCGCGTGTTCGCAGGCTTGCGGGCGAC TTTCGAGTCGGTGGCTGCCAGTGGCAACCTCGACCGCTTCGACTTCTTTGTGCTCAGCGATACCAACGACACTGACATCGCCGTGGCCGAGCAACAGGCC TGGCTGGACGTGTGCCGCGAGACCAAGGGCTTTGGCCGCATTTTCTACCGCCGTCGCCGCCGTCGCGTCAAGCGCAAGAGCGGGAACCTCGACGACTTCT GCCGTCGCTGGGGTGGCGAGTACAAGTATATGGTCGTGCTCGACGCCGACAGCGTCATGAGCGGCGAATGCCTGAGCAGCCTGGTGCGCCTGATGGAGGC CAACCCGGACGCCGGCATCATCCAGACCGGGCCGAAAGCCTCGGGCATGGACACCCTGTATGCACGCATGCAGCAGTTTGCTACCCGCGTGTACGGCCCG CTGTTCACTGCCGGCCTGCACTTCTGGCAGCTGGGCGAGTCGCACTACTGGGGCCATAACGCGATCATCCGCATGAAGCCGTTCATCGAGCACTGCGCCC TGGCGCCGTTGCCGGGCAAGGGCGCGTTCGCCGGGGCCATTCTTTCCCACGACTTCGTCGAAGCTGCGCTGATGCGCCGCGCCGGCTGGGGCGTGTGGAT TGCCTATGACCTGCCGGGCAGCTACGAAGAATTGCCGCCGAACCTGCTCGACGAGCTCAAGCGCGACCGCCGCTGGTGCCACGGCAACCTGATGAACTTC CGCCTGTTCCTGGTCAAGGGCATGCACCCGGTTCACCGTGCGGTGTTCCTCACCGGCGTGATGTCGTACTTGTCGGCGCCGCTGTGGTTCCTGTTCCTGG TGCTGTCTACCGCACTGCTGGCGACCAACACGCTGATGGAGCCGCAGTACTTCATCGAGCCGTACCAACTGTACCCGCTGTGGCCGCAGTGGCATCCGGA GAAGGCCGTGGCGCTGTTCTCCACCACTATCGTACTGCTGTTCCTGCCCAAGCTGCTCAGTGTCATCCTGATCTGGGCCAAGGGCGCCGTCGAATTTGGC GGGCGCATCAAGGTCACCCTGTCGATGCTGATGGAGATGCTGTTCTCCATGCTGCTGGCGCCGGTACGGATGATCTTCCACACCCGCTTCGTCCTGGCCG CGTTCCTCGGCTGGGCGGCGACCTGGAATTCGCCGCAGCGTGACGATGACTCCACCCCGTGGAGCGAAGCGCTGCGCCGGCATGGCCCGCAGACCCTGCT GGGCTTTGCCTGGGCCGGGCTGGTGGCGTGGCTGAACCCGAGCTTCCTGTGGTGGCTGGCGCCGATCGTTGGCTCGCTGGTGCTGTCGATCCCGGTATCG GTCATCTCAAGCCGTACCCGCCTGGGCCTGGCAGCCAAGGACGAGAAGCTGTTCCTCATCCCCGAGGAATACGCGACGCCGCAAGAGCTGCTGGCGACCG ACCAGTACACCCACGAAAACCGCTGGCACGCCCTGCATGACGGCTTCGTACGTGCGGTGGTCGACCCGCGGCAGAATGCCCTGGCCTGCGCCATGGCCAC TGCCCGTCACGGCGAGGCTGCGCCGATCGAGGCGCTGCGTGCAGAGCGCGTGGCCAAGGCACTTGAAACCGGGCCGAAAGGGCTGGACCTCAATACCCGC CTGGCCTTGCTCAGCGACCCGGTGGCCTTGAGCCGCCTGCACGAACAGGTCTGGGCGCAGCACAATGCGGCGTGGATCGATGTGTGGCGTGCCTCGATCA AGAACGACCCGCATTCGCCGCTGCTGCCACTGCACCCGGAGAATGAAGGCCAACCGGCACTCGTCGGCGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CAGGGCTTGGGGCCGCTTTGCGGCCCTGTCGCGACACAAGGCCGCACCTGCAGGGATATGCATTCCCTTGTAGGCGCGGCCTTGTGTCGCAAAACGCGGG CGATGCCCTCGCCAGCAATGTCCCTGCATCTTGGATTTTGGCCAACAAAGTCCCCCCCGGCTCTAGGTCCGAGCGCCGCCATGCGTTAGCATCCCTCTCC GATAATGCGCATCGGCCGGTACGGCCGTGCCAAGACAATAAGACTCGCTTCTTTTCTTGCTAGGGGACTTGGTGATGATCAAGAAATACCTTTCGCGACT GCTGGTCGGTGTTACCGCCCTGGTCGCAGTAACTGCGGCCCAGGCTGGCGCCATCGATGAAGCGGTCAAGCGCGGCACGCTGCGGGTGGGCATGGACCCA ACCTACATGCCGTTCCAGATGACCAACAAGCGCGGCGAGATCATCGGCTTTGAAGTCGATATCCTCAAAGCCATGGCCAAATCCATGGGCGTCAAGTTCG
|
|
| Amino Acid Sequence |
>glucosyltransferase MdoH
MSNSSARPESLGEYLAHLPLSDEQRAELASCTSFGELHQRLAANPAANATEAVQASVGTRLTVGSAAELEDAEMLGVDGSGRLCLKIAPPIKRTKVVPEP WRTNVLIRLWRRMTGRTNAPQPPKRELPAARWRTVGSIRRYILLALMIGQTIVAGWYMKGILPYQGWSFVDLDEVVRQPLWDTVVQVWPYALQTSILVLF GILFCWVSAGFWTALMGFLELLTGRDKYKISGSSAGNEPIAPEARTALVMPICNEDVPRVFAGLRATFESVAASGNLDRFDFFVLSDTNDTDIAVAEQQA WLDVCRETKGFGRIFYRRRRRRVKRKSGNLDDFCRRWGGEYKYMVVLDADSVMSGECLSSLVRLMEANPDAGIIQTGPKASGMDTLYARMQQFATRVYGP LFTAGLHFWQLGESHYWGHNAIIRMKPFIEHCALAPLPGKGAFAGAILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNF RLFLVKGMHPVHRAVFLTGVMSYLSAPLWFLFLVLSTALLATNTLMEPQYFIEPYQLYPLWPQWHPEKAVALFSTTIVLLFLPKLLSVILIWAKGAVEFG GRIKVTLSMLMEMLFSMLLAPVRMIFHTRFVLAAFLGWAATWNSPQRDDDSTPWSEALRRHGPQTLLGFAWAGLVAWLNPSFLWWLAPIVGSLVLSIPVS VISSRTRLGLAAKDEKLFLIPEEYATPQELLATDQYTHENRWHALHDGFVRAVVDPRQNALACAMATARHGEAAPIEALRAERVAKALETGPKGLDLNTR LALLSDPVALSRLHEQVWAQHNAAWIDVWRASIKNDPHSPLLPLHPENEGQPALVGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|