Pseudomonas sp. URMO17WK12:I8, F639_RS0125085 (proY)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I8 F639DRAFT_scaffold00010.10, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGATAGCCTGCCGACCTCGGCCAACCAGGAAGACCACGTGTCCATGGCCCCAGCCGCTGGCAAGCGCCTGTGGGAAATGGCCGAGAACACCCGTGGTGTG CTGGCCATCGAATGGCTGGGGGCGTGTCAGGGGCTGGACTTGCGCAAAGGCCTGAAGACTTCGGCGAAGCTGGAGCAGGCGCGCCAGGCGCTGCGTCGTG AAGTGCCGCACTATGACCGTGACCGCTTCTTCGCGCCGGACATCGAGGCAGCTGTCGAGCTGCTGGCCAAGGGCAGCCTGACCGGGCTGCTGCCTGCTGG TGTCCTGCCTAGCCTGTGATGCCCCCCAGGGCCGCTTTGCGGCCCTTTCCGACCGGTCCGGCGCCCCGGCAAGGCCGCTCCTACAAAGGCAACGCATTCT TTTGAAGGAGCGGCCTTGCCGTGGCGCCGAACCGGTCGGAATGGGCTGCAAGGCAGCCCCCATCGACCTCACGACCACAAAAACAATTTAAGGACGTGAC
|
|
| DNA Sequence for Gene |
>F639_RS0125085
|proY
ATGCAACAAGCTCAAGGTCTAAAGCGCGGGCTAACGGCCCGCCACATCCGTTTCATGGCCCTAGGCTCTGCCATCGGCACCGGCCTGTTCTACGGCTCTG CCTCGGCCATCCAGATGGCCGGCCCGGCTGTGCTGCTGGCCTACCTGATCGGTGGCGCTGCGGTGTTCATGGTCATGCGCGCCCTCGGCGAAATGGCCGT GCACAACCCGGTGGCCGGCTCCTTTGGCCACTATGCCACCACCTACCTCGGCCCCATGGCCGGCTTCATCCTCGGCTGGACCTACGCCTTCGAGATGGTC ATCGTCGCCATCGCCGACATTACCGCCTTCGGTATCTACATGGGCTTCTGGTTCCCCGAAGTGGCCCGCTGGATCTGGGTGCTGGGCATCGTCTTCGTGA TCGGCGGCCTCAACCTGTGCAACGTCAAGGTCTTCGGTGAAATGGAATTCTGGCTGTCGCTGCTCAAGGTCGGCGCCATCGTGGCGATGATCCTGGCCGG CCTCGGCATCATGGCTTTCGGCTTCAGCCAGGTGAGTGGCGAACATGCCGTGGGCATCAGTAACCTGATCGAGCATGGCGGCTTCATGCCCAATGGCATC GGCGGCCTGATCGCCTCCTTCGCCGTGGTGATGTTCGCCTTCGGCGGCATCGAGATCATCGGCGTCACCGCCGGTGAAGCCAAAGATCCGCAGCGCGTCA TCCCCAAGGCGATCAATGCCGTGCCCCTGCGCATCCTGCTGTTCTACGTGCTCACCCTGTTCGTGCTGATGTGCCTGTACCCGTGGCCGCAGATTGGCAG CGAGGGCAGCCCGTTCGTGCAGATTTTCAGCAACCTGGGCATCGGTTCGGCCGCTGCCGTGCTGAACATCGTGGTGATCTCGGCCGCGATTTCGGCGATC AACAGCGACATCTTCGGTGCCGGCCGCATGATGTATGGCCTGGCCCAGCAAGGCCACGCGCCGCGCAGCTTTGGCAAGTTGTCCAAGCACGGTGTGCCAT GGATGACCGTGGTGGTCATGGGCGCGGCGTTGCTGGTCGGGGTGTTGCTCAACTACCTGATCCCGGAAAACGTGTTCCTGCTGATCGCATCCATCGCGAC CTTCGCCACCGTGTGGGTGTGGCTGATGATCCTGGTCACCCAGGTGGCCATGCGCCGCAGCATGAGCCGTGAAGAGGCGGCCCAGCTGAAGTTCCCGGTA CCGTTCTGGCCCTATGGCCCGGCCATGGCCATCGCCTTCATGGTGTTCATTTTCGGTGTGCTCGGTTACTTCCCGGATACCCAGGCGGCCTTGCTGGTCG GTGTGGTCTGGGTGGTGTTCCTGGTGGCGTCCTACCTGCTGTGGTGCAAGCCGCGCGCAGGCAAGCACGTACCGGTCGAGCTGCACCGCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCAAGGAGATTGCACATGAGAACCCTCTGGCAGCACTGCCACGCGGCAACCATGGCCGAGGGCCGTTACTCGATCATCGAGGATGCGGCCATCGTCACCA ATGCCGGGCTTATCGAGTGGATTGGCCCACGCACCGAGTTGCAGCCGTTCGACGTTGACCGCACGGTGGACCTGGGCGGCGCCTGGGTCACCCCGGGGCT GATTGACTGCCACACCCATGCGGTGTTCGGTGGCAACCGCAGCGGCGAGTTCGAGCAGCGCCTGCAGGGCGTCAGCTATGCCGAGATCGCCGCCCAGGGC GGCGGTATCGCCAGCACCGTGCGGGCCACCCGCGCGGCCAGCGAGGATGAGCTGTTCGCCAGTGCTCGCCAGCGTGTCCAGGCGTTGATGCGCGATGGCG TGACCACCCTTGAGGTCAAGTCCGGCTATGGCCTGGACTTGGCCAATGAGCGCAAGATGCTGCGTGTAGCCCGGCGGCTGGCCGACGAGCTGCCGTTGGC
|
|
| Amino Acid Sequence |
>proline-specific permease
MQQAQGLKRGLTARHIRFMALGSAIGTGLFYGSASAIQMAGPAVLLAYLIGGAAVFMVMRALGEMAVHNPVAGSFGHYATTYLGPMAGFILGWTYAFEMV IVAIADITAFGIYMGFWFPEVARWIWVLGIVFVIGGLNLCNVKVFGEMEFWLSLLKVGAIVAMILAGLGIMAFGFSQVSGEHAVGISNLIEHGGFMPNGI GGLIASFAVVMFAFGGIEIIGVTAGEAKDPQRVIPKAINAVPLRILLFYVLTLFVLMCLYPWPQIGSEGSPFVQIFSNLGIGSAAAVLNIVVISAAISAI NSDIFGAGRMMYGLAQQGHAPRSFGKLSKHGVPWMTVVVMGAALLVGVLLNYLIPENVFLLIASIATFATVWVWLMILVTQVAMRRSMSREEAAQLKFPV PFWPYGPAMAIAFMVFIFGVLGYFPDTQAALLVGVVWVVFLVASYLLWCKPRAGKHVPVELHR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|