Pseudomonas sp. URMO17WK12:I8, F639_RS0119030
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I8 F639DRAFT_scaffold00002.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTACTGATTTCTTCATGAATAGAACCGATCGATGTCCATATGGGCAGGTTCGCGGCGATAGCCGCACAAGGGCCGAAGAATATCACCCGGCGCCTGGTCA GGTGATGGCTGCGGTGACGAAATCCTATGATTAGGAAGCATCCGACAAGCCTGCTCTCAACTTCAGACTTGTTAATTTTTACGGACATTCAAGTCGATCG AAACCGCAAAAAACCGCGCAAAAACCGAACATACAGGCCGTTTAACCGATAAATATTTCAATTTCGCAACATCTTGTCATGTTTAACTTGACGCCTCCCT ACCAATCGTTTTTTATTTTCACCACCTCGCCCAGCGCCCGATCCACGAAGAAGAAAAAGTCGCGCCGTCATGATGCTCGGATGCCCCTGCCCGCACGCTT CAACCTCCTCGCCAAGGCACTGCCAGCCTGACGTCGGCGCCTAGCACGCGCCTATCTCTGCTCCGAACAAAAAAGGTGAACAACATGGAGCCACACCAGC
|
|
| DNA Sequence for Gene |
>F639_RS0119030
ATGCAGCATGACCACAACGCCACCGGCAACGGCCAATTCCGTAAATCCCTGCGCCTCTGGCACGTAGTCATCATCGGACTGGCGTACCTCACGCCAATGA CCGTGTTCGACACTTTCGGCATCGTGTCCGGCATTACCTCTGGCCACGTTCCCAGCGCCTACCTGCTGGCCCTGGCCGGCGTCCTGTTCACCGCCGTGAG TTACGGCACACTGGTACGCCGCTTCCCGCAGTCCGGCTCCGCCTATACCTATACCCAACGCGCCATCAACCCGCACGTGGGTTTCCTGGTCGGCTGGTCT TCGCTGCTTGATTACCTGTTGCTGCCCATGGTCAACGCGCTGCTGGCCAAGCTCTACCTCTCGGCCATGTTCCCCGAGGTGCCAGCGTGGATGTGGGTGG CCGGCTTCGTCACCCTGATCAGCCTGATCAACATGCGCAGCATCAACCTGGTCGCGCATTTCAACCTGCTGTTCGTGATCGTGCAGCTGATGATCATGTC GGTGTTCATCTACCTGTGCGTACGCGGGCTGGACCAGGGCGAAGGGCTGGGGACCACCTGGAGCCTGACACCTTTCGCCGACTCGCAGACGCAGCTCAGC GCCCTGGCAGCCGGCGCAACCATCCTGTGCTTCTCGTTCCTGGGCTTTGACGCAGTGACTTGCCTGTCCGAAGAAACCAAGGATCCGGGCAAGATCATTC CGCGTGCGATCTTCCTCACCGCCCTGATCGGTGGCGTCGTGTTCATCGGTGTGTCGTACTTCATGCAGGCGTACTTCCCGACCAACGCTCGCTTCCATGA CCCAGAAGCGGCACTGCCGGAAATCGCCCTGTACGTCGGTGGCAAGCTGTTCCAGTCGATCTTCATCGCCTGCACGGTGATCAACACCATCGCCTCGGGC CTGGCTTCGCAGACCAGCGTATCGCGCCTGTTGTACGTGATGGGCCGCGACAATGTGATCCCGAGCGGCGTGTTCGCCCGCCTGCATCCGCGCTACAAGA CTCCGGTAGTGAACATTGCCGTGGTCGGCGTGATTGCCCTCTCGGCGATCTTCTTCGACCTGGTCACCGCCACCTCGATCATCAACTTCGGCGCGCTGGT AGCGTTCAGCTTCGTCAACCTGTCGGTGATCAGCCACTGCTACCTGCGCGAGGGCAATCGCCAGGGGCTGGCCAACAAGATGAAGTACCTGATCCTGCCA ACCATCGGCTTCTGCATCATCGCCAAGCTCTGGCTTGACCTCAACGAACATTCGTTGATATTCGGCGGCCTGTGGGCAGTCGCGGGGCTGATACACCTGG CCTGGCTGACCAAAGCCTTCCGTGTCGCACCACCGAACTACGTCGCTGAATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CACTAGCCACCAACAACGCCCGCGCCTGAACGCGGGCGTTGTTCTTGTTCGAAAAGGAATGCCCAGATGCCGCTGCGCCGCCTCTCCATTCAATGGAAGA TCACCCTGCTCGCCGGCCTTTGCTTGCTGGCCATCGTCGCCTTGCTGGTCGCCAGCTCACTGGCTCAATCACGGCGTAGCGCAGCGTTGGTCAACCAGGC CAATACCGAAATGCTCGAACACAGCGCGCGCCTGCGCCTGCAGGCCCACGCCGAGACCCAGGCGTTGCGCATCCAGCGCTATTTCATGGACGCCTACCAG TACGGCAACGGGTTCGCCCGCCTGGTCCAGGTGCTCAAGACCAAGGGCGGCAGCGACCTGCGCGCCGAACTGACCCGCCAAGCCCACGCCAGCCTTGCCG GCAACCCGGACGTGATCGGCCTGTACCTGGTGTTCCAGCCCAATGCGCTGGACCACCAGGATAGCCAGTTCATCGGCCAGGAGAACAGCGGCAGCAACGC
|
|
| Amino Acid Sequence |
>Putrescine importer PuuP
MQHDHNATGNGQFRKSLRLWHVVIIGLAYLTPMTVFDTFGIVSGITSGHVPSAYLLALAGVLFTAVSYGTLVRRFPQSGSAYTYTQRAINPHVGFLVGWS SLLDYLLLPMVNALLAKLYLSAMFPEVPAWMWVAGFVTLISLINMRSINLVAHFNLLFVIVQLMIMSVFIYLCVRGLDQGEGLGTTWSLTPFADSQTQLS ALAAGATILCFSFLGFDAVTCLSEETKDPGKIIPRAIFLTALIGGVVFIGVSYFMQAYFPTNARFHDPEAALPEIALYVGGKLFQSIFIACTVINTIASG LASQTSVSRLLYVMGRDNVIPSGVFARLHPRYKTPVVNIAVVGVIALSAIFFDLVTATSIINFGALVAFSFVNLSVISHCYLREGNRQGLANKMKYLILP TIGFCIIAKLWLDLNEHSLIFGGLWAVAGLIHLAWLTKAFRVAPPNYVAE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|