Pseudomonas sp. URMO17WK12:I8, F639_RS0116730
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I8 F639DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TCTCCGGCGGGCAGAAGCAGCGTCTTGCAATCGCCCGGGCGCTGCTGGTGGATGCGCCGATCCTGCTGCTTGACGAGGCCACCAGCGCCCTCGATGCGCA AAGCGAGCACCTGATCCAACAGGCGCTGCCGAGCCTGATGGCCGGGCGTACCACGCTGGTCATTGCGCACCGCCTGGCCACGGTGCAACACGCCGAGCGC ATTGCAGTGATCGACAAGGGGCGGGTGGTCGCGGTCGGCACGCATCGGCAGTTGATCGAGCAAAGCCCGTTGTACGCTCGCCTGGCCGAGTTGCAGTTCA CCACGGGCTAAGTGTCGCGTATGTGTAACATTTCTGTAGCAATTGCCTGAGAGTATTGAATTCAACTGTTGCGTAAGTGCTCGACCTGGCTGCTATCGAT TGATGGCAGCTTTTTTTTGGCCTGCGAACGAGGACACGGATGTCTGTCGCGGCGCTGCAATGGCGCGCCATTTCCTTATTCCTTGTTCCCGAGATCCGCG
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| DNA Sequence for Gene |
>F639_RS0116730
ATGTTGCGTAAATCACTCAGAGTGCAAATTCTCACCCTGCTCGGCGGCAGCCTGGCGACCATGCTGCTGATCGCCCTGATGTGCTTCCAGTTCCTGTCCT CCAGCGTGCGTGGCTATGGCGAACTGGTGGACGGGCCGCTGCGGGCCTCGCAATTGATCGACGAAGCCAACCTGCAGTTCAAGATCCAGGTGCAGGAATG GAAGAATGTGCTGCTGCGTGGGCGCCAGCCAGCCGAGCTGGAAAAGTACTGGCAGCAGTTTCAGGCCCGTGAGCAACAGGTGCAGCAGTTGCTGGGGCAA CTGATCGACAGCAGTGACGCCAAGCTCAAGGCGCCTTTGCAGCAATTGCGTGACAGCCATCGGCAGCTGGGCCAGGCCTACGAGCAGGGGCGCCAGGCGT TTCTGGCGGCGGGTGGTGATCCGGTAGCCGGTGACCAGGCGGTGAAGGGGGTGGATCGGGCTGCCAGCGAGCAGATGAGCGCGTTGGTCGAGCAATTGCG CGCCGACGCCCGGGCCCGGGCCGCCCAGATCAATGCTGATGCCGAACGCACCGTATGGCTGGGCGTGCTGGTGATGCTCGGTTCGGCGTTGATGGTCGGC CTGCTCAGCCTGTGGCGGGTCAACCGCAGCCTGATCGAGCCGATTGGCCAACTGATCGAATACGTTGCGCAGCTGAGCCAGGGCCACTTCGCCGCCCGCG TCGACAGCCGCCGCGAGGACGAACTGGGCCGCCTGGCGCGAGCTGCCAACACCCTGCGTGACTTCCTCGCCGAGACCGTTGGCCGGCTCAAGGACAACGC CCAGGAGCTGGAAGGTGCCAGTGGCCAGTTGCGCAGCATCGCCGGTGACATGGCCCGCGGTACCCACGACCAGTTCCAGCGTACCGACCAGGTCGCCACG GCCATGCACCAGATGTCCGCCACCGCCCAGGAAGTGGCCCGCCACGCTGCCGAGGCGGCACGCGCCGCCGATGATGCCGACCACAGCGCCCAGGCAGGCG AGCAGGTGATGCAGCAGACCATCGACATCATCGGTGTGGTCAACCGCGAGATCGCCGGCACTGCCGCGGTCATCCGCGACCTGGAAAATGACAGTTCACG CATCGGCAAGGTGCTCGAGGTGATCCGCGGCATCGCCGAGCAGACCAACCTGCTGGCCCTTAATGCCGCCATCGAGGCCGCCCGCGCAGGGGAGGCCGGG CGTGGCTTTGCCGTGGTCGCTGACGAGGTGCGCAGCCTGGCTCAGCGCACGGCAGCGTCGATCGCCGAGATTCACCAGATTATCGAAGCCGTGCAGTCGG GCGCGGTGGAGGCGGTCAAGGCCATCGAGAGTGGCCAGCAACGCAGCGAGGAGGGCGCCGAGCAGGTGCAGCAGGCCGGGCAGATGCTGCAGCGCATCAC GTTGGCAGTTGAAGCGATCCGCGACATGAACCGGCAGATCGCCACGGCGGCCGAAGAGCAGACCAGCGTGGCCGAGGACATTTCGCGCAACCTTATCGAA ATCACCCGGATTGCCACAGCCAACCAGCAGGCGGTGCAGCATACCGAGCAGGCGGGGCAGCGCCTGCATGGGCTGTCGGGGCAGTTGGGTGAGGTCACTT CGCGCCTTACCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCATAGCCGGGCCCGCGCAGCGGCCCTTTCCGACCGCTCCGGCGCCCCGGCAAGGCTGCTCACAGGGGGGCCATAGACTTGCAGGAGCGGCCTCGTGTC GCGAAGAGGCCCCCAGGGGGGAAATCCGCCATCTGCCAGGATAAAACCGACCCCGCTGTGGCGGAATGTCGCCATGCGACGCGCTGCCACACCCGTATTC ATTGGCTCAAACCCAGTTGGCACGCTCCCTGCTCTGTGCGGCGCGCGTGTATATAACAACTGGACAACATCAATGAAGAAATTTCTGCTGACGTTCCTCT GCCTGGGCGTCATCGGCTGCTCCAAGCCCGAAGCGCCTGAAACCACCGTCGATGTGCTGCTGATCGGCGGCGGCATCATGAGTGCGAGCTTGGGGACTTA CCTCACCGAGCTGGAGCCGAACTGGAAGGTCGGCGTCTACGAGCGCATGGACCAGGTTGCCGAAGAAAGCTCCAATGCCTGGAACAATGCCGGTACCGGC
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| Amino Acid Sequence |
>chemotaxis protein
MLRKSLRVQILTLLGGSLATMLLIALMCFQFLSSSVRGYGELVDGPLRASQLIDEANLQFKIQVQEWKNVLLRGRQPAELEKYWQQFQAREQQVQQLLGQ LIDSSDAKLKAPLQQLRDSHRQLGQAYEQGRQAFLAAGGDPVAGDQAVKGVDRAASEQMSALVEQLRADARARAAQINADAERTVWLGVLVMLGSALMVG LLSLWRVNRSLIEPIGQLIEYVAQLSQGHFAARVDSRREDELGRLARAANTLRDFLAETVGRLKDNAQELEGASGQLRSIAGDMARGTHDQFQRTDQVAT AMHQMSATAQEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGVVNREIAGTAAVIRDLENDSSRIGKVLEVIRGIAEQTNLLALNAAIEAARAGEAG RGFAVVADEVRSLAQRTAASIAEIHQIIEAVQSGAVEAVKAIESGQQRSEEGAEQVQQAGQMLQRITLAVEAIRDMNRQIATAAEEQTSVAEDISRNLIE ITRIATANQQAVQHTEQAGQRLHGLSGQLGEVTSRLTA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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