Pseudomonas sp. URMO17WK12:I8, F639_RS0112900
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I8 F639DRAFT_scaffold00020.20_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGTGGCGATCACTGCCAGCGCCGAGTGGCTGGGGCCGGTGGCCAGCGGCCTGTTGGCGCCGATCCCGGTGATTGCCTGGCCGCTGGCGGTGTTCGCCC ATGTTCAAGGTGGGCACCAGGAACTGGGGGCCATCGTGCGTGGCAACGCCATTGGGGCGGTAGGCGTACTGGGCTTCTACCTGGCGGTCAAAAGCACCAT CGCACAGTGGGGCAGCGTGCCGTCCATTGCCGTCGCCGTGGTGCTGGCCGTGGTGGCAACCTTCGCCCTGGCCAAGTTGCTCGACCGCCGCTGACTTCTG CACATCGGGCGGGTGCGTGTATCGCTTTGTATCAATGCGCCTGCCACCGCTACTCGCTTACAAATCCTGCGCTCGCCTGATACGCCCGGGATACATGCCT GGGGCCAAATGAGCCAGCCCGAACGAACACGCCTTACGGCCCGCGTTCCCTGGCTCTTTCGCCCTTGAGGCATGACCGTATGACTATCAGGAGAAACACC
|
|
| DNA Sequence for Gene |
>F639_RS0112900
ATGACCCGTATCCAGTTCCCCAACAAGACCCGTCTCGGCCTGCTCGGCATCGCCCTGGTAGGGGGTATCAACCTGGCGTCCTCGGCCTTTGCCGTCGAGG CATTGCCACAAGGCTATCAACTGGCGGCTGCGGAAAAGACCGGGGAGGGCAAGTGTGGGGAAGGCAAGTGCGGCGCCAGCGGCGCCAAGGCCAAAGCCAC CCAGGCCGAAGGCAAGTGCGGTGAGGGCAAGTGTGGTGCCAGCGGCAAGGCCAAGGTTACTCAGGCTGAAGGCAAATGCGGTGAAGGCAAGTGTGGCGAT GCTTCGTTTGCCCGCACCGACGCTGACCATGACGGCCGCGTTTCCCGTGCCGAACTGCTGGCGGTCGCCCCGGGTGCCGGCGCTGAGTTCGATGCGATCG ACGCCAACCACGACGGCTACCTTTCCGAGGCCGAGGTCTACCAGTTCCGCAAGCACCAGTTCGACGCCAACGGCAATCCCTTCCCGACCGACCTGTACAG CAAGCTGAGCCAGGCGAAGAACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCTCGACAGCATCCTCCCCAGGCGCAGGTCGGGGAGGGCGCTGTACCTCAAGGAGCATGCCGATGAACCCTTCATCTACCCTGCAGGGTGCGGGCCTGG GCTTGCGCCGCGCGCTGTTGCCCGAACTGCTGAACATGGACGCCGGTGCGGTGGATTTTCTCGAATGTGCCCCGGACAACTGGATCGGTGTCGGCGGTGC CTTCGGCGAAGGCCTGGCGCAACTGGCCGAGCGCTATCCGCTGGCCTGCCATGGCCTGTCGCTATCGCTGGGCGGGCCGGCACCGCTGGACCATGGCTTC CTGCGCCAGATCCGCGCATTTCTCGACCGTCATCAGGTACCGCTATTCAGTGAACATTTGAGTTACTGCGCCGATGACGGTCATCTCTACGATCTCATTC CGATGCCGTTCACTGACGAAGCAGTGCGCCATACCGCCCAGCGGATTGCTGAAGTCCAGGATGCCCTTGGCCGGCGCATTGCCGTGGAGAACATCTCGTA
|
|
| Amino Acid Sequence |
>hypothetical protein
MTRIQFPNKTRLGLLGIALVGGINLASSAFAVEALPQGYQLAAAEKTGEGKCGEGKCGASGAKAKATQAEGKCGEGKCGASGKAKVTQAEGKCGEGKCGD ASFARTDADHDGRVSRAELLAVAPGAGAEFDAIDANHDGYLSEAEVYQFRKHQFDANGNPFPTDLYSKLSQAKN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|