Pseudomonas sp. URMO17WK12:I8, F639_RS0106040
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I8 F639DRAFT_scaffold00009.9_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
TTGTTTTCCTACCTGGCCGATGATGCCACCCTGCGTACGCTGACCTTCTGGAACCTGGGCAGCCTCAACGGTGCAAGCTACGAGCGCCTGTGGCCTCTGC TGCTGATCGCAGGCGGTGTGGCGATGTGGTTGCCGCGCCGCTCGAAGGCGTTGAATGCGTTGTTGCTGGGAGAGTCGGAGGCACGGCACCTGGGGGTTGA TGTCGAGCGCCTCAAGCGCGAGTTGGTGTTCTGCACGGCGTTGGGTGTGGGCGCAGCAGTGGCGGCTGCGGGGCTGATCGGTTTCATCGGCCTGGTGGTA CCCCACCTGGTGCGTTTGCTGGCCGGGCCCGATCACCGCGTGGTACTGCCTGCATCGTTGCTGGCTGGGGGCATACTCATGCTGTTCGCCGATCTCGCAG CCAGGCTGCTGCTGGCGCCTGCTGAGCTGCCGATCGGTATCGTCACCGCTTTTATTGGCGCGCCGTTCTTCCTGATTCTGCTGATACGAGGGCGCAGTTG
|
|
| DNA Sequence for Gene |
>F639_RS0106040
ATGTTGCAAGTCGAGGGGCTGCACCTGAAGCGGGGCAACAATGATGTGTTGCTCGGGATTGATCTGCAGTTGAGCCCTGGGCAGGTGGTGGGCGTTCTCG GTCCCAATGGCGCCGGCAAGAGTAGCCTGCTCGGGGTACTGTGTGGCGAGTTGGCGCCGGACCGCGGAAAAGTGACGCTGCAAGGGCGGCCGCTGGTTGA CTGGGCTGGGCAGGCGCGCGCCAGGCACCTGGCGGTGCTGCCGCAGGTTTCCAGCCTGGGGTTCTCGTTCAAGGTCGAGGAAGTGGTGGCCATGGGGCGC ATGCCCCACGACACCGGGCAACGGCGTGACGCCGAAATCGTAGCAGAGGCCCTGCAGGCAGCGGATGCCTCGCACCTGGTGGGGCGAAGTTACCTGGCCT TGTCTGGCGGTGAGCGGCAGAGGGTGCACCTGGCCCGCGTGCTGGCTCAGCTTTGGCCTGGTGTAGAGGGCACCACGCTGTTGCTTGATGAGCCGACTTC GATGCTCGACCCACTGCATCAGCACACTACCCTGGAAGCCGTGCGCCGTTTCGCCGACAGCGGCGCCGCCGTGCTGGTGATTCTGCATGACCTGAACCTG GCGGCGCGCTACTGTGATCGCATCTTGCTACTCGAAAGCGGGCGCTGCCATGCCCTGGCCGCACCACCGGAGGTACTGACACCGGCTTCGCTCAAGGTGG TCTTCGGTATCGACGTGCTGGTGCAGGCGCACCCGGAGCGGGGGCACCCGCTGATCATTACCCGCTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GAGGCACTGCTCGTGGCTCATCCGTTGCTGTGCGGTTCGTTACTGTGCCTGGTGCTGACGCTGGGTGGTTGCCAGGCCAGCTTGCCGCCGTTGCCTGCAT GGCAGAGCAGCGAAGGGCGCGATAACGCCGAGCTAGGGCAGATCCACGATCTGGCCAGCGGGCGGGTGATCACTCCCGAACAGTTGATCGAGAGCCTGGC CGATGCGCCGCGCGTGCTGGTCGGTGAGAAGCATGACAACCCGGATCATCACGCCTTGCAGCTGTGGTTGATGCGTGCGTTGCAGCAACGCCGGGCACAG GGCAGCCTGCTGCTGGAAATGCTGCAACCCGAGCAGCAGCCCCGCGTCGATGCGCTAGCGGGGCAGGCGCAATTGCCGCAAGACCTGCCCAAAGCCCTGG CTTGGGAAGATGGCTGGGACTGGCAACTTTACGGCCCAATCGTGCAAGAGGCTTTGCAGCGCCATGTTCCGCTGCTGGCGGCCAACCTGTCACCCACAGA
|
|
| Amino Acid Sequence |
>hemin ABC transporter ATP-binding protein
MLQVEGLHLKRGNNDVLLGIDLQLSPGQVVGVLGPNGAGKSSLLGVLCGELAPDRGKVTLQGRPLVDWAGQARARHLAVLPQVSSLGFSFKVEEVVAMGR MPHDTGQRRDAEIVAEALQAADASHLVGRSYLALSGGERQRVHLARVLAQLWPGVEGTTLLLDEPTSMLDPLHQHTTLEAVRRFADSGAAVLVILHDLNL AARYCDRILLLESGRCHALAAPPEVLTPASLKVVFGIDVLVQAHPERGHPLIITR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|