Pseudomonas sp. URMO17WK12:I8, F639_RS0104885
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I8 F639DRAFT_scaffold00007.7_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGGGGCGTCGGCCAGCAGGTCGGGCAGGCTCACGCTCAGGCTGTGCCAGCCGATATCCGGGAACTTGCGCCGCAGCGGGCCGACCACATTGGGCCAGTCG GCGTTTTCGCCAGCGCCAGGGACGATGATCACTGCGCCCTGCGGCTCACTGTCGTTGGCTGGCTTCCACAAGGCCAGGAAGCTGTCCGCTCCGGCCTGCA GGGTCTGTTGTTCGGCCTTCGGTGCCAGGCGTTCCAGGGCTTGCGCATCTTCCTGGCTACGCTCCAGCAGGGGCGGGCGTGGCGCCGGAGCAGCTGGCGC TTCGGCCGTCGCCTCCGGCTTTGCAGCGTCAGCGGCCAGGGCGCCGAGTGGTAGGAGCGAGGCCAGGCAGCACATTGCCAGCGTCGTGCGATAAAGTGTG GACATGAATCAACCCAAGGCCAGAATGATACCGGCAGCCTAATAGTATTTGCCCGCGACGGCCATGCTGCATGGCCGCCTTTGCCAAGATGAGCGTGTAG
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| DNA Sequence for Gene |
>F639_RS0104885
ATGAAGCGATTGCGTCGCCTGTTGGTTATCGGCGGGTTGTGCCTGCCCTTGATCGCCTTGGCACGGCCAGAGCTGCCGCCGCCGGTGGTGCTGGAGCCTG CCCAGCAGCAATGGCTCGATAGCCATCGCAGCCTGCGTGTCGGCCTGGTGCTGCAGGCGCCCTACGCGCAGTTCGACCGCCGCCTGCAGCAGCTTTATGG CGCCAACGTCGAGTTGGTGAACGGGTTGGGGCAGGCACTGGGCCTTGATCTGACCTGGCGCAACTTCGCCGACCAGGCCAGCCTTGAACATGCGCTGCAG GCGGGTGAGATCGATTTTGCCCCGGGCCTGACGCAAACACCGACAACCCTGCGCCTGTGGCTGTTCAGCGACCCTTACATGCGGGTGCCGCAGCTGGTGG TGGGGCCACGTACCGGGGCGATGGCCGTGGAGCTGGAAAAGCTCGATGCTGAAAGCCGGGTCGCGGTGCGCATGCCCAGCGCCCTGGCCGACTACCTGCG CGGCAATTACAGCGGCCTGAACCTGCAGGGCGTGCCCAGCGAGCGCGAAGCCCTGCAGCTGGTGGTCGGTGGCCAGGCCAGTTACGCCGTGCTAGATGAA GCACAACTGAGCCGGCTCTCACGCGAGAGCGAGTTCGCCGAACTGGTGGTGGTGGGTGATATCGGCTTGCCGCAGTTGCTGCGGGTAGGTTCGCGACGCG ATTGGCCGGTGCTTGCCGATGTGCTCGAGCGCGGGTTGCAGGCCATGCCGGCCAAGGAGCTGGAACAACTTCACCAGCGTTGGTTGCAGCCCAAATACCC GCGTTTGAGCGACTCGCCTGGCTTCTGGCAGAACCTGGCCTTGCTGTTCGGCCTGTTGCTGCTGTGTGCCCTGGCCACGCTGATATGGCAGCGTCGCCAG CAACGCCAACTGGAACGTAGCCTGCTGGCCGCGCGGGAAAGCCTGACCGAGCGACAGGGGCGCGAAGAGGCGCTGCGCCTGAGCCAGTTCGCCATCGATC AGAGCACGGTGGGTATCCTCTGGGTCAACTGGGACAGCCATGTGCGTTACGCCAACCATGCGGTGGAGGGCATGCTCGGCTATGCCGAGGCCGAACTGCT GGAGCGCCCGCTGATCGATTTTGAGCCGAACCTGACCATGGATCGCTGGCTCGAACTGTGGAAGGGGGCGCGTGCTGGCGATGGCGGTGCGCGGCAGTTC GAAACCCAGTGCCGGCGCGCCGATGGCAGCTTGTTGCCGGTGGAGTTGTCGCTCAGTTTCCTGCGCTTTCGCGATGCCGAATACCTGGTGGTGTACCTCG CCGATGTCACCGAGCGCCATCGCGCCCTGGCGGCATTGCGCGAAAGCGAGGCGCGGCTCAAGGGTATCGCTGGCAACGTGCCGGGCCTGGTGTTCCGGCT TGAGCCTGCGCCTGCCGAAGGTGAGCCGGAGTTCCCTTACATCAGCGAGGGCAGCGAAGCACTGGTCGGCTACACCCCCGCGCAGATCCAGCACCCGCAG ATGGGACTGCGCAACCTCGTTCATCCGGACGATCGGGCGAACTATCACCAGGTACAGGATCTGGCTATCGCCGGCGATCAGGACTGGTCGTGGCAGGGGC GTATTCTCACCCGCCAGGGCGAGCAACGCTGGGCCGACATCAAGGCCAGTGCCCGCCGTTTGCCCAATGGCCGGGTGGCCTGGGACGGTGTCGTCTGGGA CATCACCCAAGGCAAGCGCGCTGAGCTGGCGCTGGCCAAGTCGCAGGAACAGCTGCGCGAACTGTCGGCGCACCTGGAAAGCGTGCGCGAGGAAGAGAAG GCTCGCATCGCCCGTGAAGTGCATGACGAACTGGGGCAGATGCTGACCGTGCTCAAGCTGGAAGTGTCGATGTGCGAGCTGGCCTTCGCCGAACTCGACC CCGGGTTGCACGAACGCCTGGGCAGCATGAAGCGCCTGATTGCCCAGCTGTTCCAGCTGGTGCGCGACGTCGCTACCGCGCTGCGCCCACCGATCCTCGA CGCGGGCATCGCCTCGGCCATCGAATGGCAGGCGCGGCGCTTCGAAGCGCGCACGCAGATACCCTGCCTGGTGCAGGTACCGGATAATCTGCCAGCATTG AGCGATGCCAAGGCCACCGGCCTGTTCCGCATTCTGCAGGAGGCGCTGACCAATGTGATGCGCCATGCCCAGGCGCACAGTGTGGAAATAGAGCTGGTAC GTGAAGACGGGCAACTGCGCTTGACCGTCAGCGACGATGGCTCCGGGTTCTGCCGCGACCAGCCCAGGCCGACATCGTTCGGCCTGGTCGGCGTGCGTGA GCGGGTGCTGATGCTCGGTGGCAGCATGGCGTTGGACAGTGAACCAGGCGAGGGCACCAGCCTGAGCGTGGCCATTCCCTTGGAGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GAGAGCAAGCGTGATTCGAGTGCTGGTGGCCGAAGACCACACCATTGTCCGGGAAGGCATCAAACAGCTGATTGGCCTGGCCAAGGACATGCAGGTGGCA GGGGAGGCCGGGAATGGCGAGCAGTTGCTCGAGACTTTGCGCCACACGCCCTGCGAGGTGGTGTTGCTGGATATCTCCATGCCGGGGGTGAGCGGCCTGG AGGCGATCCCGCGTATTCGTGCGTTGCACGATGCCCCGGCGATCCTGATGCTGTCGATGCACGACGAGGCGCAGATGGCTGCTCGCGCGCTGAAGGCGGG TGCCGCCGGTTATGCGACCAAGGACAGCGACCCGGCCCTGCTGCTGACGGCCATTCGCCGGGTCGCGAGCGGCGGGCGTTACATCGACCCGGCGCTGGCT GACCGGATGGTCTTCGAGGTAGGCCTGACCGAAACCCGGCCGCTGCATACGTTGCTCTCCGAGCGTGAATTCTCGGTGTTCGAGCGGCTGGCCCAGGGGG
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| Amino Acid Sequence |
>histidine kinase
MKRLRRLLVIGGLCLPLIALARPELPPPVVLEPAQQQWLDSHRSLRVGLVLQAPYAQFDRRLQQLYGANVELVNGLGQALGLDLTWRNFADQASLEHALQ AGEIDFAPGLTQTPTTLRLWLFSDPYMRVPQLVVGPRTGAMAVELEKLDAESRVAVRMPSALADYLRGNYSGLNLQGVPSEREALQLVVGGQASYAVLDE AQLSRLSRESEFAELVVVGDIGLPQLLRVGSRRDWPVLADVLERGLQAMPAKELEQLHQRWLQPKYPRLSDSPGFWQNLALLFGLLLLCALATLIWQRRQ QRQLERSLLAARESLTERQGREEALRLSQFAIDQSTVGILWVNWDSHVRYANHAVEGMLGYAEAELLERPLIDFEPNLTMDRWLELWKGARAGDGGARQF ETQCRRADGSLLPVELSLSFLRFRDAEYLVVYLADVTERHRALAALRESEARLKGIAGNVPGLVFRLEPAPAEGEPEFPYISEGSEALVGYTPAQIQHPQ MGLRNLVHPDDRANYHQVQDLAIAGDQDWSWQGRILTRQGEQRWADIKASARRLPNGRVAWDGVVWDITQGKRAELALAKSQEQLRELSAHLESVREEEK ARIAREVHDELGQMLTVLKLEVSMCELAFAELDPGLHERLGSMKRLIAQLFQLVRDVATALRPPILDAGIASAIEWQARRFEARTQIPCLVQVPDNLPAL SDAKATGLFRILQEALTNVMRHAQAHSVEIELVREDGQLRLTVSDDGSGFCRDQPRPTSFGLVGVRERVLMLGGSMALDSEPGEGTSLSVAIPLE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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