Pseudomonas sp. URMO17WK12:I8, F639_RS0100575
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URMO17WK12:I8 F639DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCCAGATGAACTTTGTCGACAACCAGGTCAACCCGCGCACCGGCACCATCCGTGGCCGCGCCGTGTTCGACAACCGTGACGGCCAGTTCACCCCAGGCCT GTATGCCCGCCTGAAGCTGGTCGGCAGCGCCCAGTACGACGCCGTGCTGATCAACGACGAAGCGGTCGGTACCGACCTTGGCAAGAAGTTCGTGCTGGTC ATGGACAAGGACAACAAGGCCGCCTACCGCGCCGTGGAACTGGGGCCGAAGCTCGAAGGCCTGCGCATCGTCCGTAGCGGCCTGGCCAAGGACGATCGCA TCGTGGTCAAGGGCCTGCAGCGCGTGCGCCCTGGCTCGCCAGTGACCCCGGAAGAAACACCCATGGCCAGCGAGCAGACGCTTGCCGCCCTCGCCCAGCA GCGCCAGGCCCTCGAGGCCAGCAACCAGGCGCACAAGGTAGCGGGCTCCACCGAAAAAGTCGCCAGCGCCCAGGCGCCACGCGGTTAAGGGACCACACCG
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| DNA Sequence for Gene |
>F639_RS0100575
ATGAACTTTTCGAAATTCTTCATTACCCGGCCCATCTTCGCCGCAGTGCTGTCGCTGGTGCTGCTGATTGCGGGCTCGATCTCGCTGTTCCAGCTGCCCA TCAGCGAATACCCCGAAGTGGTACCACCGACCGTGGTGGTGCGCGCCAACTTCCCCGGTGCCAACCCCAAGGTGATCGGTGAGACCGTTGCCGCGCCACT GGAACAGGCCATCACCGGTGTCGAGAACATGCTGTACATGTCCTCGCAGTCCACTGCCGACGGCAAGCTGACCCTGACCATCACCTTCGCCCTGGGCACG GACCTTGACAATGCCCAGGTGCAGGTGCAGAACCGCGTCACCCGTACCCAGCCCAAGCTGCCGGAGGAAGTGACGCGGATCGGTATCACCGTCGACAAGG CGTCGCCCGACCTGACCATGGTCGTGCACCTGACCTCGCCGGACAAACGCTACGACATGCTCTACCTGTCCAACTACGCCATCCTCAACATCAAGGATGA GCTGGCACGCCTGGGCGGCGTCGGCGACGTGCAGCTGTTCGGCATGGGCGACTATTCGCTGCGCGTGTGGCTCGACCCGAACAAGACCGCTTCGCGCAAC CTGACTGCCAGCGACGTGGTGGCCGCCATCCGCGAGCAGAACCGCCAGGTCGCCGCCGGCCAGCTGGGCGCCCCGCCCGCCCCCGGTTCGACCAGCTTCC AGCTGTCGATCAACACCCAGGGCCGCCTGGTCAACGAGGAAGAGTTCGAGAACATCATCATCCGCGCCGGTGCCGATGGTGAAATCACCCGCCTGAAGGA CATCGCCCGGGTCGAGCTCGGTTCCAGCCAGTACGCCCTGCGCTCGCTGCTGAACAACCAGCCGGCGGTGGCCATCCCGATCTTCCAGCGCCCGGGCTCC AACGCCATCGAGATCTCCGACGAAGTGCGGGCAAAGATGGCCGAGCTGAAGAAGGACTTCCCGGAAGGCATGGACTACAGCATCGTCTATGACCCGACCG TGTTCGTCCGTGGCTCCATCGAAGCCGTGGTGCACACGCTGTTCGAAGCGCTGGTGCTGGTCGTGCTGGTGGTCATTCTGTTCCTGCAGACCTGGCGCGC CTCGATCATCCCGCTGCTGGCCGTACCCGTTTCGCTGATCGGCACCTTTGCGGTGATGCACCTGTTCGGCTTTTCGCTCAACGCCTTGTCACTGTTCGGC CTGGTGTTGGCCATCGGTATCGTGGTGGACGACGCCATCGTCGTGGTGGAGAACGTCGAACGCAACATCGGTCTGGGCCTGAAACCGCTTGAAGCCACGC AGAAGGCCATGAGTGAAGTGACCGGGCCGATCATCGCCACGGCGCTGGTGCTGTGCGCGGTGTTCGTGCCTGCCGCGTTCATTTCCGGCCTTACCGGGCA GTTCTACAAGCAGTTTGCGCTGACCATCGCCATTTCCACCGTGATCTCGGCATTCAACTCGCTGACCCTGTCGCCAGCACTGGCTGCCGTGCTGCTCAAA GACCACCATGCGCCCAAAGACCGTTTCTCGCGGTTCCTGGAGCGGCTGCTGGGCAGCTGGCTGTTCGCCCCGTTCAACCGCTTCTTCGACCGGGCCAGCC ACCGCTACGTGGGCGGCGTGCGCCGGGTTATCCGCTCCAGCGGCATCGCCCTGTTCATCTATGCCGGGCTGATGGGCCTGACCTACCTAGGCTTCTCCAG CACCCCGACCGGTTTCGTCCCGGCGCAGGACAAGCAGTACCTGGTGGCCTTCGCCCAACTGCCTGACGCCGCCAGCCTCGACCGCACCGAGGCGGTGATC AAGCGCATGAGTGAAATCGCCCTGGAGCAACCGGGCGTGGCCGATTCGGTGGCCTTCCCGGGCCTGTCGATCAACGGGTTCACCAACAGCCCGAACAGCG GCATCGTGTTCACCCCGCTCAAACCGTTCGACGAGCGCAAGGACCCGAGCCAGTCGGCCGCGGCCATCGCTGCCGCGCTGAACGCCAAGTTCGCTGACAT CCAGGACGCTTACATCGCGATCTTCCCGCCACCGCCCGTGCAAGGCCTTGGCACCATCGGCGGCTTCCGCCTGCAGATCGAAGACCGCGGCAACCTGGGC TACGAAGCGCTGTACAAAGAGACCCAGAACATCATCGCCAAGAGCCACAACGTGCCGGAGCTGGCGGGCTTGTTCACCAGCTACCAGGTCAACGTGCCGC AAGTCGATGCCGCCATCGACCGGGAAAAGGCCAAGACCCACGGCGTGGCGATCACCGACATCTTCGACACCCTGCAGGTCTACCTGGGCTCGCTGTACAC CAACGACTTCAACCGCTTTGGCCGCACCTACCAGGTCAACGTCCAGGCCGAGCAGCAGTTCCGCCTCGATGCCGAGCAGATCGGCCAGCTGAAGGTGCGC AACAACCTCGGCGAGATGATCCCGCTGGCGACCTTCCTCAAGGTCAGCGACACCTCTGGCCCTGACCGGGTAATGCATTACAACGGCTTCATCACCGCCG AGATCAACGGCGCTGCTGCCCCAGGGTACAGCTCCGGCCAGGCCGAGGCGGCAATCGAGAAACTGCTCAAGGAAGAGCTGCCCAACGGCATGACCTTCGA GTGGACCGACCTCACCTACCAGCAGATCCTCTCCGGCAATACCGCGCTGTTCGTGTTCCCGCTGTGCGTGCTGCTGGCGTTCCTGGTGCTGGCCGCGCAG TACGAAAGCTGGAGCCTGCCGCTGGCGGTGATCCTGATCGTGCCGATGACCCTGCTGTCGGCCATCACCGGGGTGATCGTGTCCGGTGGCGACAACAACA TCTTCACCCAGATCGGCCTGATCGTGCTGGTGGGCCTGGCGTGCAAGAACGCGATCCTGATCGTCGAGTTCGCCAAGGATGAACAGGCCAAGGGCCTCGA CCCGCTGGCTGCGGTGCTGGAAGCCTGCCGCCTGCGTCTGCGGCCGATCCTGATGACCTCGATCGCATTCATCATGGGTGTGGTACCGCTGGTGTTCAGC TCCGGAGCCGGCTCGGAAATGCGCCATGCCATGGGTGTGGCGGTGTTCTCGGGGATGATCGGCGTGACTGTGTTCGGCCTGTTCCTGACCCCGGTGTTCT TCTTCCTGATCCGCCGCTTCGTCGAGCGTCGCCAGGCCCGCAAGGCCGAGCCCGCGCACGTGCTGGAGAACCACGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACCTGCTCAAACCACTGACACCGAGCCTGCTGGCGCTGGCCCTGGCGGCCTGCGCGGTAGGCCCGGACTACAAGACCCCGGACACCGAACCTGCGCATTT CGACAGCACTGATGTGCAGGCCAAGGCCTTTGACCGCAGCCGCTTCGAAAGCGTGTGGTGGAAGCAGTTCGACGACCCGGTGCTGAACCAGCTGGTGCAG GCATCGCTAGACGGCAACCGCGACCTGCGCGTGGCGTTCGCCCGGCTCAAGTCGGCTCGGGCGATCCGCGATGACGCCGCCAACGACCAGTTCCCGGTGG TCACCAGCCGCGCCAGCAGCGAGATCGGCAAGGGCCAGGTGCCCGGCCAGACCACCCAGCGGGTCAACCAGGAACGGTACGACCTGGGCCTGGACATGGC CTGGGAACTTGACCTGTTCGGCCGCATCCAGCGCCAGATCGAGGCCAGCGAAGCCCAGGAAGCGGCGGCCCAGGCCGACCTGCAACAGCTGCAGGTCAGC
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| Amino Acid Sequence |
>transporter
MNFSKFFITRPIFAAVLSLVLLIAGSISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVAAPLEQAITGVENMLYMSSQSTADGKLTLTITFALGT DLDNAQVQVQNRVTRTQPKLPEEVTRIGITVDKASPDLTMVVHLTSPDKRYDMLYLSNYAILNIKDELARLGGVGDVQLFGMGDYSLRVWLDPNKTASRN LTASDVVAAIREQNRQVAAGQLGAPPAPGSTSFQLSINTQGRLVNEEEFENIIIRAGADGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGS NAIEISDEVRAKMAELKKDFPEGMDYSIVYDPTVFVRGSIEAVVHTLFEALVLVVLVVILFLQTWRASIIPLLAVPVSLIGTFAVMHLFGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIGLGLKPLEATQKAMSEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAISTVISAFNSLTLSPALAAVLLK DHHAPKDRFSRFLERLLGSWLFAPFNRFFDRASHRYVGGVRRVIRSSGIALFIYAGLMGLTYLGFSSTPTGFVPAQDKQYLVAFAQLPDAASLDRTEAVI KRMSEIALEQPGVADSVAFPGLSINGFTNSPNSGIVFTPLKPFDERKDPSQSAAAIAAALNAKFADIQDAYIAIFPPPPVQGLGTIGGFRLQIEDRGNLG YEALYKETQNIIAKSHNVPELAGLFTSYQVNVPQVDAAIDREKAKTHGVAITDIFDTLQVYLGSLYTNDFNRFGRTYQVNVQAEQQFRLDAEQIGQLKVR NNLGEMIPLATFLKVSDTSGPDRVMHYNGFITAEINGAAAPGYSSGQAEAAIEKLLKEELPNGMTFEWTDLTYQQILSGNTALFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVIVSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKDEQAKGLDPLAAVLEACRLRLRPILMTSIAFIMGVVPLVFS SGAGSEMRHAMGVAVFSGMIGVTVFGLFLTPVFFFLIRRFVERRQARKAEPAHVLENHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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