Pseudomonas syringae DSM 10604, PSSR_RS0125525
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae DSM 10604 Contig57, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCGCCGTTCGTCTGTATTAATTTACAGACCTTCGTCGCAAGCTTCTGCCTTGCCCGGCCAACCAGCCGGGCTGTCGGCAGTTACAGCCTCGCTGTTTTG CGTTTGCTTTATTGATTGACCCTGTCCAGGCCGCACATGCGACTCGGATATTCAGTCAAGCACGTCCCGGCCTGTTCACAGGCTACATCGGTCATGCCCA CTCGGGCAGCACATCGACCGATGACAAGACGAGTATGCCTTGATGACTTCGCAAGAAGCTCAGCCAAGGCAGCGTCTTCCGTGTCCTCAGGCTCTGACCA CTCACCGTGGGCAAAAAAGCTTGTGGCATTTCTGATCCACTCGCGGGATCAGATCTATTCCTTTCAGGCCAACACCGTCCTTCGGATGCAAAGACGTGCC CGTTTATTGCCGACGTCTTCAAAAAGACGGCTGACAGGCTGACGGAACGCTCGTAGAGTCATCCGATACTTTTGCACCACGCTTGAATGATGAGAACGCC
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| DNA Sequence for Gene |
>PSSR_RS0125525
ATGGCCGGGCTGATTCCCCAGAGCTTTATCGACGACCTTCTGAACCGCACCGATATTGTCGATGTTGTCAGTTCGCGCGTGCAGCTCAAGAAAGCCGGGA AGAATTACACCGCGTGCTGCCCGTTCCACAAAGAGAAAACACCCTCTTTCAGCGTCAGCCCGGACAAGCAGTTCTATTACTGCTTCGGTTGCGGCGCAGG TGGCAACGCGCTCGGCTTCATCATGGACCACGACAACCTGGACTTCCCCCAGGCCGTCGAAGACCTGGCCAAGGCCGCCGGCATGGAAGTGCCTCGCGAA CAGAGCGTAAAAGGCCAGAAGCCCCGACAGCCGACCGATTCCCCGCTCTACCCGCTGCTGACCGCCGCCGCCGAGTTCTACCGCCAGGCCCTGAAAAGCC ACCCGTCACGCAAGGCTGCGGTGGATTACCTCAAGGGCCGCGGGCTGTCCGGCGAAATCGCCAGAGACTTTGGCCTGGGCTTCGCCCCTCCCGGCTGGGA CAACCTGTACAAGCACCTGAGCAGCGACTCATTGCAGCAAAAGGTGATGATCGATGCCGGCCTGCTGATCGAGAACGCCGAAACCGGCAAACGCTACGAC CGCTTCCGCGACCGGGTGATGTTTCCGATCCGTGACTCACGCGGGCGCGTCATCGCCTTTGGCGGCCGCGTACTGGGCGATGATAAACCCAAGTACCTGA ACTCCCCGGAAACACCGGTCTTCCACAAGGGTCAGGAGCTGTACGGGCTGTTCGAGGCGCGCAAATTCAATCGCAACCTCGATGAAATCATCGTCGTTGA AGGCTACATGGACGTCATCGCCCTGGCCCAGCAAGGGTTGCGCAATGCCGTGGCCACGCTGGGTACTGCAACCAGCGAAGAGCATTTGAAGCGTCTGTTT AGGGTCGTGCCTAACGTACTGTTCTGCTTCGACGGCGATCAGGCCGGACGCAACGCTGCATGGCGTGCGCTGGAAGCGACCCTGTCGAACCTGCAGGACG GACGCCGGGCGCGCTTTCTGTTTCTTCCCGAAGGCGAAGACCCGGACACGCTGGTGCGCTCCGAAGGCACCGACGCGTTCAAGGCACGCATCAATCAGCA CGCGCAGCCGCTGGCCGATTATTTTTTCGAGCAACTGACCAAAGAGTCCGATCCGCGCTCGCTGGAGGGCAAGGCGCACATGGCCACCCTCGCGGCGCCA TTGATCGACAAGGTACCCGGCGCGAACCTGCGTATTCTGATGCGTCAGCGCCTGACCGAAATTACCGGACTGACCGGCGAAGCCGTCAGCCAGCTGGTGC AGAGCACGCCGGCAGAGGCACCACCGAGTTACGACCCGTATGTCGACTACGACGCCATGCCTGATTTTGCCGATTACCAGCCACAAGGCGGTTATGAGCC TCAGCAGGAATGGACGCAGAAGAAAACCGGCGGTCCGAATCAAAAAAAATGGGACAACAAATCCTGGGGCAAAAAAGGCAAGCGCCAGGACTTCGAACCT CGAACGCCGCGTGTACCCACCGCCGTCGAGCCGCCTATGCAGGCCGCACTGAGAACCCTGCTGCATCACCCCGAATTGGCGGAAAAGGTCGAAAATGCCA GCCATTTCGCTGCAGAAGACCAATCCAACGCACAACTGCTGGTCGCTCTTATCGAAGCCCGGCAAAAGAATCCGAACCTTCGGTCGTTACAGTTGATAGC GCGATGGCACGGTACTGAACAGGGCCGCTTGCTGCGTGCCCTGGCAGAAAAGGAATGGCTGATTGAGGCCGATAACCTTGAACAACAGTTTTTCGACACT ATAACTAGCTTATCCGCTCGCCAACGCGAGCGCAGTCTGGAACATCTGATCAGCAAGGCTCGGCAGACCGAGTTGAGCGCAGAAGAGAAAATTCAGCTTA GGGAACTGCTAAATCGCAATGTTCCCGCACAAACCCCGACCTCAACTGGCGCGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGTCATAGCTCGGGTATAATCCTCGGCTTGTTTTTTGCCCGCCAAGACCTTCAGTGGATAGGGTGTTATGTCCGGAAAAGCGCAACAGCAATCTCGTATC AAAGAGTTGATCACCCTGGGTCGTGAGCAGAAGTATCTGACTTACGCAGAGGTCAACGACCACTTGCCCGAGGATATTTCAGATCCCGAGCAGGTGGAAG ACATCATCCGCATGATCAACGACATGGGGATCCCGGTACACGAGAGTGCTCCGGATGCGGACGCCTTGATGCTGGCCGACGCCGATACCGACGAGGCAGC CGCAGAAGAAGCGGCTGCAGCGTTGGCAGCGGTCGAGACCGACATCGGGCGTACCACCGATCCTGTTCGTATGTACATGCGGGAAATGGGTACCGTTGAA CTTTTGACCCGTGAAGGCGAAATCGAAATCGCCAAACGTATCGAAGAAGGCATCCGTGAAGTGATGGGCGCAATTGCGCACTTCCCAGGCACGGTTGACC
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| Amino Acid Sequence |
>DNA primase
MAGLIPQSFIDDLLNRTDIVDVVSSRVQLKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFGCGAGGNALGFIMDHDNLDFPQAVEDLAKAAGMEVPRE QSVKGQKPRQPTDSPLYPLLTAAAEFYRQALKSHPSRKAAVDYLKGRGLSGEIARDFGLGFAPPGWDNLYKHLSSDSLQQKVMIDAGLLIENAETGKRYD RFRDRVMFPIRDSRGRVIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGLFEARKFNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRLF RVVPNVLFCFDGDQAGRNAAWRALEATLSNLQDGRRARFLFLPEGEDPDTLVRSEGTDAFKARINQHAQPLADYFFEQLTKESDPRSLEGKAHMATLAAP LIDKVPGANLRILMRQRLTEITGLTGEAVSQLVQSTPAEAPPSYDPYVDYDAMPDFADYQPQGGYEPQQEWTQKKTGGPNQKKWDNKSWGKKGKRQDFEP RTPRVPTAVEPPMQAALRTLLHHPELAEKVENASHFAAEDQSNAQLLVALIEARQKNPNLRSLQLIARWHGTEQGRLLRALAEKEWLIEADNLEQQFFDT ITSLSARQRERSLEHLISKARQTELSAEEKIQLRELLNRNVPAQTPTSTGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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