Pseudomonas syringae DSM 10604, PSSR_RS0119570

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae DSM 10604 Contig39, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCCGCTGCACGATATGTCCAAGCTGTCCGATGCACTGGCCATGGAGGCAGCGCCTGCGGCCCACCAACTGGCACCGCATGCGCCAGTGGTCAAGGCACTG GACGGCAAACTGGTGCGCTTACCGGGCTACATCGTGCCGCTCGAGGTCAGTGAGGAAGGCCGGGTGACGGAGTTTTTGCTGGTGCCGTATTTCGGCGCCT GCATTCATGTGCCGCCACCACCGGCGAACCAGATCGTGCATGTCACGAGCGAGCTGGGTGTGAAGGTCGATGAGCTGTATCAGCCGTACTGGATCGAAGG ACCGATGCAGGCCAAGTCGTCTTCCAGCGAACTGGCAGAAGCGGGTTATCAGATGCAGGCAGACAAGATTCTTGTCTACGAGTTGCCGGATTCATAAGGA TCACGAGGTTCCCAGCGATTTCATTGAGCTGAGTCAAAGTCGCCGCTCGACAGCGCTTTAACATTACGCCCATAAATTTTGACTGATCTCTGGAGCCTCC
DNA Sequence for Gene
>PSSR_RS0119570
ATGCACAAGCATCTGCTACGCGCGTCCCTTGTCGCGCTTACCCTCACCGCCCCGGTCGCGGCACACGCCTACCAGTCCGGCGACTTCATCGTTCGCGCCG GTGTCGCGCACGTCCAGCCCAATGAAGACAGCGGCGAAGTGCGCCTCGACGGTGCCAAGGTTTCCGGCACCAAAGCGACTGTCGACGGCGAAAACCAGCT GGGCCTGACCTTCGCCTACATGCTGACCCAGCACGTCGGCGTCGAGCTGCTGGCCGCCACACCGTTCAACCACACCGTATCGGTCAAAGGCCTCGGGCCT GGCCTGGATGGCAAGCTGGCCGATATCAAACAACTGCCGCCGACGCTGTCGTTGCAGTACTACCCGATGGAACCGTCGTCGAAATTCCAGCCGTACGCTG GCGTGGGCATCAACTACACCACGTTCTTCGATACCGACCTGACCGGCAACCGTAAGAATCAGGGTTTCAGCAACCTCAAGCTCAAGGACTCGGTCGGCCT GGCCGGGCAGTTGGGCATGGATTACATGATCACCGACAACGTACTGCTCAACGCCTCGGTCTGGTACGTCGACATCGACACCAAAGCAACCGTGGACGGC CCGTCAGCCCTGGCCGTCGGCAAGACCAAGGTCGACGTGGACATCGACCCGTGGGTGTACATGGTGGGCGTGGGTTACAAGTTCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGAACGTCTCAAGCGCCACAAACACAAAGGCACCCTTATTGGGTGCCTTTGTGTTTTGTAGACCTGATGATCTCGTACCAACTCCATGACGAAGTAAT GCCGCGCTTTTTGCAGGAGCGGGCTGGTCCGAAGGCAGTTACATTCGATGCACTTTCTGCGCCTGCAATATCGTCTTCGCGAACAAGTTCGCTCCTACAG GTGCTCACAGGCTTTTGCAGGAGCGAACTTGTTCGCGAATAGGCAGTTACACTCGATGTAATTTCTGCGTCTGCAATAGCGGCTTCGCGAACAAGTTCGC TCCTACAGGTGCTCACAGGCTTTTGTAGGAGCGAACT
Amino Acid Sequence
>membrane protein
MHKHLLRASLVALTLTAPVAAHAYQSGDFIVRAGVAHVQPNEDSGEVRLDGAKVSGTKATVDGENQLGLTFAYMLTQHVGVELLAATPFNHTVSVKGLGP GLDGKLADIKQLPPTLSLQYYPMEPSSKFQPYAGVGINYTTFFDTDLTGNRKNQGFSNLKLKDSVGLAGQLGMDYMITDNVLLNASVWYVDIDTKATVDG PSALAVGKTKVDVDIDPWVYMVGVGYKF
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site