Strain | Pseudomonas syringae DSM 10604 Contig19, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TGATGTGCCCTACGAGACCGACGAAGAGCGCGAATGCGCTGAAGGCGTTGGCGGCTACGCACGACCCATGCCGGCCAGCTGGATGCAACGCCAGGCCGCC GCTGTGCATGAGCGCGCGAAACTGTCGGACATCGTCATCACCACCGCGCTCATTCCCGGCCGCAAAGCCCCGGTGCTCCTCGGCGCAGAAACCGTGGCGC AGATGAAGCCCGGCTCGGTGGTGATCGACCTGGCCGCTGCACAAGGCGGCAACTGCCCGCTGACCGTTGCCGATCGAGTGGTTGTCGAGCACGGCGTGAC CATCGTCGGCCACACCAACCTGCCCGCTCTGGTCGCCGCCGATGCATCGGCGCTCTACGCCCGCAACCTGCTGGACTTCATGAAGCTGCTGTTCGACAAG GACGGCACATTCTCGATCAACCTCGAAGACGACATCGTCGCCGCATGCCTGATGTGCCGCGACGGGCAAGTTGTCCGCAAGAACGGCTGAGGACACACCA
|
|
DNA Sequence for Gene |
>PSSR_RS0111975
ATGGAAGAGCTGATTTCCCCCGGCGTCTACAACCTGATCATTTTCGTACTGGCGATTTATGTCGGCTACCACGTGGTCTGGAATGTCACGCCTGCGCTGC ACACGCCGCTCATGGCGGTCACCAATGCCATCTCCGCCATCGTCATCGTTGGCGCCATGCTCGCCGCTGCGCTCACGGTCACCCCGCTGGGCAAGACCAT GGGCACGCTGGCGGTCGCACTGGCGGCCGTGAACGTGTTTGGCGGGTTTCTGGTCACTCGGCGGATGCTGGAAATGTTCAGGAAAAAGGCCCCCAAGGCA AAGGATGAGGCGCCCAAGTCATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCATGAATCTGGTTACCCTGCTGTACCTGATCGCATCGATCTGCTTCATCCAGGCACTCAAAGGCTTGTCGCACCCGACCACCTCGCGCCGTGGCAACTT GTTCGGCATGCTCGGCATGGGCCTGGCGGTCATCACCACAATCGGTCTGGTGTTCAAGCTCGCGGCGCTGTCTACCGCTGAAGGGACCAGCGCAGGCATC GGCTACATCGTGGTCGGCCTGCTGGTGGGCGGAACCGCCGGCTCGATCATGGCCAAGCGCGTCGAAATGACCAAAATGCCGGAGCTGGTGGCGTTCATGC ACAGCATGATCGGCCTGGCGGCAGTGTTCATCGCTATCGCGGCGGTCGTCGAGCCTCAATCACTGGGCATCGTTCGCAATCTGGGCGATGCGATTCCGGC CGGCAACCGTCTGGAGCTGTTCCTCGGGGCCGCCATCGGGGCGATCACCTTCTCGGGTTCGGTCATCGCTTTCGGCAAACTCTCGGGCAAGTACAAATTT
|
|
Amino Acid Sequence |
>NAD(P) transhydrogenase
MEELISPGVYNLIIFVLAIYVGYHVVWNVTPALHTPLMAVTNAISAIVIVGAMLAAALTVTPLGKTMGTLAVALAAVNVFGGFLVTRRMLEMFRKKAPKA KDEAPKS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|