Pseudomonas syringae DSM 10604, PSSR_RS0109670

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae DSM 10604 Contig14, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCGGAGACATTACAGTGGATCGCCGCTTATATCCTGCCTGCCGAGGTCCATGTCGGAAATGCGTGTGGCAGCGAAAGTCAGCATGACGCCTCAGAACGA AGTTCGCGGTACCACGACGCACTGCCGGTTTTGCAGACAAAAGGGCTTAAAGCCGCTGTGCAATTAGTGAATGATCACTTGAACGGTGTGGAAGGCGGGC GAGAGCGATTTTTCTGCAAGCTATGCATCGCACGTCTCTGTATCGATGCAAACAAATACGAGTTAGCGAAGGTTCAACTTGAGTATCTTGATCAGGAGCT CCAATCAGCAAGCCTCCCGGCATGGGAACCCGCGATCTTCCTCGATGTGTCGCGCTTGTTATATAGCTGTTACGAGCGAACGGCGCTGAACGATAAGGCA GCAGCGCGCAAAGAAGTGATTTACCAGAGGTTGTGTCATCACGACCTTGAAAGATTTATTGATGGCTAACGTACAGTTTAATAAATTGAGGGGAAATGGA
DNA Sequence for Gene
>PSSR_RS0109670
ATGGCCAGAGAAGGCTCTGTAGCGCCCAAAGAGCGGATCAACGTGACGTTCAAGCCTGCTGTTGGTGGCGCGCAGGAAGAAATAGAGCTGCCACTTAAGT TGCTGGTTCTTAGCGATTTCATACAGCGCGCGGACGAGCGAAAGCTTGAGGACCGTAAATCAATCAGTATCGACAAGAACAATTTCGATGATGTGCTGGC GAAGCAGGAGCTTGAGCTGGTACTGAATGTACCTGACCGCTTGCAGGCTGAAAGCGGGGCTAACGATCTCACTGTCAGCATCAAGGTCTCTTCGATGAAA GACTTCAACCCTGCCAGTCTCGTCGAACAGATTCCTGAGCTTAAAAAGTTGATGGAGCTGCGCAACGCCCTCATGGCGCTCAAGGGGCCGTTGGGGAACA TGCCTTCTTTTCGTAAGGCCATCGAGCAGGTCATTACGGATGAAACATCGCGTAAGAACGTGCTGGATGAGCTTGGCCTGGATGTCGCGGCGCAACAGTA A
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CATCGGACCCATTGTCAGGAATTAACATATGAACACAAAAGCCATACCGCAGCGCGATGCAAGTGAGCTTCACCATGGAATTCTCGATCAGATTATTGCA CATACCCGATTAGAGCCTTGTGACGACGCCTATGGTATTGCCAAACGAGGGGTGGCTGCATTTATTGAAGAACTGCTGAAACCGCGTAATAACAATGAGC CAGTCAAAAAAGCGCTGGTTGATCGGATGATTACCGAGATTGACGTCAAGCTGAGTCGCCAGATGGACGAGATCATCCATCATGCAGAGTTTCAGGCGTT GGAAGCATCATGGCGCGGGCTGCAGTTACTGATTGATAGAACCGATTTCCGCGAAAATATAAAAATCGAGTTGTTAAGTGTTTCCAAGCAAGATCTTCTG GACGATTTTGAAGGCTCGCCTGAAGTGGTTCAATCGGGCCTCTACAAACATGTCTATACCGCTGAATATGGTCAGTTTGGCGGTAATCCCGTGGGCGCGA
Amino Acid Sequence
>Type VI secretion system protein ImpB-2
MAREGSVAPKERINVTFKPAVGGAQEEIELPLKLLVLSDFIQRADERKLEDRKSISIDKNNFDDVLAKQELELVLNVPDRLQAESGANDLTVSIKVSSMK DFNPASLVEQIPELKKLMELRNALMALKGPLGNMPSFRKAIEQVITDETSRKNVLDELGLDVAAQQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site