Pseudomonas syringae DSM 10604, PSSR_RS0108120 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae DSM 10604 Contig12, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTGGAAACCGACATTCCGGTGTTCGGCATCTGCCTCGGCCATCAGCTTCTGGCGCTGGCCGCGGGTGCCAAGACCGTGAAGATGGGCCACGGCCACCAC GGTGCCAACCACCCGGTCCAGGATCTGGACACCGGTGTGGTCATGATCACCAGCCAGAACCACGGTTTTGCGGTGGATGAGGCAACCCTGCCGAGCAACG TTCGCGCCATTCACAAGTCGCTGTTCGACGGCACCCTGCAGGGTATCGAACTGACCGACAAGAGCGCATTCAGCTTCCAGGGTCACCCTGAAGCGAGTCC GGGCCCGAACGACGTCGCGCCTTTGTTCGATCGCTTTATCGAAGCCATGGCCAAGCGCCGCTGACCGGTTGCCTTGAGACTGTAATACGCAGGTGCCCAG GGCGGCCCCGGACTCAATGTCCGGTCGCTGCCGCCCAGGCCACCTCAGACAAATGTTCAAGACGGCTTGCCGACTGACCTGCGGATTTGAGTGACAACCC
DNA Sequence for Gene
>PSSR_RS0108120 |carB
ATGCCAAAACGTACAGATATTAAAAGCATCCTGATTCTCGGCGCCGGCCCCATCGTGATCGGCCAGGCCTGTGAATTCGACTACTCCGGCGCCCAGGCCT GCAAAGCTCTGCGTGAGGAGGGTTACCGTGTCATCCTGGTGAACTCCAACCCTGCCACCATCATGACCGACCCGGCCATGGCTGACGCCACCTACATCGA GCCGATCAAGTGGCAGACCGTTGCCAAGATCATCGAAAAAGAACGTCCGGACGCACTGCTGCCAACCATGGGTGGCCAGACGGCTCTGAACTGCGCACTG GATCTGGAGCGCGAAGGCGTTCTGGAGAAGTTCGGTGTTGAAATGATCGGCGCCAACGCTGACACCATCGACAAGGCAGAAGACCGTTCGCGCTTCGACA AGGCGATGAAGTCCATCGGCCTGGCGTGCCCGCGCTCCGGTATCGCGCACAGCATGGAAGAAGCCAACGCAGTTCTTGAAAAGCTCGGCTTCCCTTGCAT CATCCGTCCGTCGTTCACCATGGGTGGCACCGGCGGCGGTATCGCTTACAACCGTGAAGAGTTCGAGGAAATCTGCGCCCGTGGTCTGGACCTGTCTCCA ACCAAGGAACTGCTGATCGACGAATCGCTGATCGGCTGGAAAGAGTACGAAATGGAAGTTGTCCGCGACAAAAAGGACAACTGCATCATCGTCTGCTCGA TCGAGAACTTCGACCCGATGGGTGTGCACACTGGTGACTCGATCACCGTAGCGCCGGCACAGACCCTGACCGATAAGGAATACCAGATCCTGCGTAATGC CTCGCTGGCAGTGCTGCGCGAGATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTCGGCATCTGCCCGAACACCGGCCGCATGGTCGTCATCGAGATG AACCCGCGTGTATCGCGTTCCTCTGCACTGGCTTCCAAGGCGACCGGCTTCCCGATCGCTCGCGTTGCCGCCAAGCTGGCAGTGGGCTACACCCTTGACG AGCTGTCGAACGAAATCACTGGCGGCAAGACCCCGGCGTCGTTCGAACCGTCGATCGACTACGTCGTCACCAAGCTGCCGCGCTTTGCCTTCGAGAAATT CGCCAAGGCCGATGCACGTCTGACCACTCAAATGAAGTCGGTCGGTGAAGTCATGGCCATCGGCCGTACCTTCCAGGAATCCCTGCAGAAAGCCCTGCGC GGCCTGGAAGTCGGTGTGTGCGGTCTTGATCCGAAGCTGGACCTGAGCCATCCGGAAAGCATGAGCACGCTCAAGCGCGAGCTGACTGTGCCGGGCGCCG AGCGTATCTGGTACGTCGCCGACGCCTTCCGCGCCGGCATGACGGTCGAAGAAATCTTCGCCATGAACATGATCGACCCTTGGTTCCTGGTGCAGATCGA AGACCTGATCAAGGACGAAGAGAAGATCAAGACCCTGGGTCTGTCGGCAATCGACCGTGACGTGATGTTCCGTCTCAAGCGCAAGGGCTTCTCCGACGCG CGTCTGGCCAAGCTGCTGGGCGTTACCGAGAAGAACCTGCGGACGCATCGTCACAAGCTCGAAGTGTTCCCGGTCTACAAGCGCGTCGACACCTGCGCAG CCGAGTTCGCAACTGACACCGCGTACCTGTACTCGACCTACGAGGAAGAGTGCGAAGCCAACCCGTCGACGCGTGACAAGATCATGATCCTGGGTGGCGG CCCGAACCGCATCGGCCAGGGTATCGAGTTCGACTACTGCTGCGTGCATGCCGCGCTGGCACTGCGTGAAGACGGTTACGAGACCATCATGGTCAACTGC AACCCGGAGACCGTCTCCACCGACTACGACACCTCGGACCGTCTGTACTTCGAGCCTGTCACCCTGGAAGACGTGCTGGAAATCGTCCGTGTCGAGAAGC CGAAAGGTGTGATCGTCCAGTACGGTGGCCAGACGCCTCTGAAGCTGGCGCGTGCTCTTGAAGCTGCCGGCGTGCCGATCATCGGCACCAGTCCCGATGC CATTGACCGTGCCGAAGACCGCGAGCGCTTCCAGCACATGGTCGAGCGTCTGAACCTGCGTCAGCCGCCAAACGCCACTGTGCGCAGCGAAGACGAAGCG ATTCGTGCCGCAGCGAAGATCGGTTATCCACTGGTGGTGCGTCCGTCTTATGTACTGGGTGGCCGTGCGATGGAAATCGTTTACCAGGAAGACGAACTCA AGCGTTACCTGCGCGAAGCGGTTCAGGTGTCCAACGACAGCCCGGTGCTGCTGGACCACTTCCTGAACTGCGCAATCGAGATGGACGTCGATGCGGTCTG CGACGGTACTGACGTGGTAATCGGCGCGATCATGCAGCACATCGAGCAGGCGGGCGTTCACTCCGGTGACTCCGCGTGCTCGCTGCCGCCGTACTCGCTG CCGGCTCACATCCAGGACGAGATGCGCGAGCAGGTCAAGAAGATGGCGTTGGAACTGGGCGTTGTCGGCCTGATGAACGTGCAGCTGGCACTTCAGGGCG AAGACATCTACGTCATTGAAGTCAACCCGCGCGCATCGCGTACGGTGCCGTTCGTTTCCAAGTGCATCGGTGTTTCCCTGGCGATGATCGCTGCCCGCGT GATGGCAGGCAAAACCCTGAAAGAGCTGAACTTCACCAAGGAAATCATTCCAAACTTCTACAGCGTGAAAGAGGCAGTGTTCCCGTTTGCCAAATTCCCT GGCGTTGACCCGATCCTCGGCCCGGAAATGAAATCGACCGGTGAAGTGATGGGTGTGGGTGATACCTTTGGCGAAGCGTTTGCCAAGGCCCAGATGGGCG CGAGCGAAGTGCTGCCGACTGGCGGTACCGCGTTCATCAGCGTACGTGACGATGACAAGCCTCTGGTTGAAGCGGTCGCTCGTGACCTTATCAATCTTGG TTTCGAGATCGTTGCCACCGCAGGCACCGCCAAGCTGATCGAGGCGGCAGGCCTGAAAGTGCGTCGCGTCAACAAGGTGACCGAAGGCCGTCCGCATGTG GTCGACATGATCAAGAACGACGAAGTCACTCTGATCATCAACACCACCGAAGGTCGCCAGTCGATCGCGGATTCCTACTCCATCCGTCGCAACGCCCTGC AGCACAAGATTTACTGCACCACTACCATTGCAGCAGGCGAAGCGATCTGTGAAGCGCTCAAGTTCGGTCCGGAGAAGACCGTACGTCGTTTGCAGGATCT CCATGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCAAATACCCAATGACCGTTCAGGGCGCTCGCGCCCTGGAAGAAGAGCTGACCCACCTGACCAAGGTGATTCGTCCCAAGTTGAGCCAGGACATCGGTAC TGCGCGCGAACTGGGCGACCTCAAGGAAAACGCCGAATACCATGCTGCCCGCGAGCAGCAGGGGATGGTCGAGGCGCGTATTCGTGATATCGAAGGCCGC ATGCAGAACGCTGTGATCATCGACGTCACGACTATTCCGCACACCGGCAAGGTGATCTTCGGCACGACAGTCGAAATCGCCAATGTCGAGACTGACGAAA GCGTGGTCTATCAGATCGTGGGTGAGGACGAAGCAGATATCAAGAAAGGCAAGATTTCAGTGGGCTCGCCCATTGCCCGTGCCTTGATTGCCAAGGAAGA GGGTGATGTCGTTGTCGTGAAAACGCCAAGTGGCGTGATCGAGTACGAAATCGTCGAAGTGCGTCATATCTGATGCTGGCGCCCGTTTTTACGGGTGCTT
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLEKLGFPCIIRPSFTMGGTGGGIAYNREEFEEICARGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPNTGRMVVIEM NPRVSRSSALASKATGFPIARVAAKLAVGYTLDELSNEITGGKTPASFEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVCGLDPKLDLSHPESMSTLKRELTVPGAERIWYVADAFRAGMTVEEIFAMNMIDPWFLVQIEDLIKDEEKIKTLGLSAIDRDVMFRLKRKGFSDA RLAKLLGVTEKNLRTHRHKLEVFPVYKRVDTCAAEFATDTAYLYSTYEEECEANPSTRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQHMVERLNLRQPPNATVRSEDEA IRAAAKIGYPLVVRPSYVLGGRAMEIVYQEDELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCDGTDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PAHIQDEMREQVKKMALELGVVGLMNVQLALQGEDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKELNFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVEAVARDLINLGFEIVATAGTAKLIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site