Pseudomonas syringae DSM 10604, PSSR_RS0103930 (hscA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae DSM 10604 Contig7, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTGGCCACGCGTTACCGTGAGCTTGCGCGCAACGTGCATCCGGATCGTTTTGCGGATGCCCCCGAGCGTGAGCAGCGTGTGGCGCTGGAGCGCTCGGCCA GTCTCAACGAGGCCTATCAGACCCTGAAAAGCCCGCCGAAAAGGGCGCGTTATCTGCTGGCAATGAACGGCAACGAAGTGCCGCTCGAAGTCACGGTGCA TGATCCCGAGTTTCTTCTGCAGCAGATGCAATTGCGCGAAGACCTCGAGGACTTGCAGGACGAGGCCGATCTGGCCGGCGTTGCGACCTTCAAGCGTCAG CTCAAGATCGCTCAGGACGAACTGAACCAGAGCTTCGCAGCCTGTTGGAATGATGCTGCACAACGCGAGCACGCTGAAAAGCTGATGCGGCGTATGCAGT TTCTCGACAAGCTCTCTCACGAAGTGCGCCAGTTAGAAGAGCGCCTCGACGATTAACCCCGCGCGGCTTCTGCCGCGCGCCAGTGATTATTCTGAACAGC
DNA Sequence for Gene
>PSSR_RS0103930 |hscA
ATGGCTTTACTGCAGATCGCCGAACCCGGCCTGAGTCCTCAACCGCACCAGCGTCGTCTGGCTGTGGGTATCGACCTGGGCACTACCAATTCTCTGGTCG CTGCAGTACGCAGCGGCCTGTCCGAACCGCTGGCCGATGCAGAGGGGCAGGTAATTCTGCCTTCTGCCGTGCGCTATCACGCTGATCGTGTCGAAGTAGG GCAGTCAGCGAAGATCGCCGCCTCCCAGGACCCGTTCAATACCGTTCTTTCGGTCAAGCGTCTCATGGGGCGTGGTCTGACCGACGTCAAGCAACTGGGC GAGCAGCTGCCGTACCGGTTCGTCGGCGGTGAGTCGCACATGCCGTTCATCGACACCGTGCAGGGGCCGAAAAGCCCGGTCGAAGTGTCTGCCGACATCC TCAAGGTTCTGCGCCAGCGTGCAGAAGCCTCACTGGGTGGCGAGTTGGTAGGCGCGGTGATCACCGTTCCCGCCTACTTCGATGATGCTCAGCGTCAGGC GACCAAGGACGCTGCCAGGCTGGCGGGCCTCAATGTACTGCGCCTGCTCAATGAGCCCACGGCTGCGGCGGTGGCCTACGGCCTGGATCAAAAGGCCGAA GGCGTGGTTGCCATCTACGACCTGGGCGGCGGAACCTTCGACATCTCTATCCTGCGCCTGACCGGTGGTGTGTTTGAAGTACTGGCCACTGGCGGCGATA CCGCTCTGGGTGGCGATGACTTCGATCATGCGATCGCCAGCTGGATTGTCACCGATGCCGGGCTGTCTGCCGATATCGACCCTTCTGCGCAACGCAGCCT GCTGCAGGCTGCCTGCTCGGCCAAGGAAGCGCTGACTGACGCCGAGTCTGTCGAGGTCGCCTACGGTGAGTGGCGTGGCACGCTGACTCGCGAGGCACTC AATGCGCTGATCGAACCTATGGTTGCGCGCAGCCTCAAGGCCTGTCGCCGAGCAGTACGTGATACCGGTATCGAGCTTGAAGAAGTCGAGGCGGTGGTCA TGGTCGGCGGTTCGACCCGTGTTCCACGCGTGCGCGAAGCGGTGGCCGAGCTGTTCGGTCGTCAGCCGTTGACCGAGATCGACCCGGATCAAGTGGTGGC CATCGGGGCTGCGATCCAGGCCGATACTCTGGCCGGCAACAAGCGTGACGGTGGCGAACTGCTGCTCCTCGATGTGATTCCGCTCTCGCTGGGGCTGGAA ACCATGGGCGGGCTGATGGAGAAGGTCATTCCGCGCAACACCACCATTCCTGTGGCACGTGGTCAGGAATTCACCACGTACAAGGATGGCCAGACGGCCA TGAAGATTCATGTCCTGCAGGGCGAGCGTGAATTGATCAGCGACTGTCGTTCGCTGGCGCGCTTCGAACTGCGTGGCATCCCGCCGATGGTCGCGGGTGC GGCAAAGATTCGTGTCACCTTCCAGGTCGATGCAGACGGTTTGCTCAGCGTTTCGGCGCGTGAAATGGGCTCGGGTATCGAGTCGAGCATTCAGGTCAAG CCGTCCTACGGGCTGACCGATGACGAGGTCACTCGTATGCTCAAGGATTCCTTCGAGTATGCCGGCGACGACAAGGTCGCTCGTGTGCTGCGTGAGCATC AGGTTGATGCCGAGCGCCTGCTCGAAGCTGTTCAGGGTGCCCTGGACGCCGATGGCGAGCGTCTTCTCGACGAAGAAGAGCGCCTGGTTATCAACCTGCA GATGGACGAACTCCGTGAACTGATGCAAGGCACCGATGGTTATGCCATCGAGCAGCAGGCCAAGCGTCTGTCGCAGGTGACCGATGCATTTGCTGCCCGA CGCCTAGATTCGACGGTAAAAGCCGCACTGGCCGGGCGCAACTTGAATGAGATTGAGGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CTGATGCCGCAGGTAATTTTTCTGCCCCACGCCGAGCATTGCCCGGACGGGCTGGTTGTAGAAGTGGAGCCCGGCACGTCTATTCTCGACATTGCCCACG AGCACCACATCGAGATTGAAAGCGCCTGTGGTGGCGTGTGTGCGTGCACTACCTGCCATTGCGTCATTCGCGAAGGGTTCAATTCGCTGAATGAAGCCGA TGAGCTGGAAGAAGACATGCTCGACAAGGCGTGGGGGCTGGAGCCGCAGTCGCGTCTGTCCTGTCAGGCCATTGTCGGCAACGAAGACCTCACGGTCGAA ATACCCAAGTATTCGCTCAACCACGCCGCTGAAGCGCCGCACTGATTCAAGGATTGCTCATGAGTCTCAAATGGGTTGATGTGCAGGAAATCGCCATCCA GCTGGCTGAAAGCCACCCGGAAGTAAATCCGCTCACCGTGAGCTTCCCCAGGTTACGTGGTCTGGTCATGGCCTTGCCTGAATTCGATGACCATCCGGAC
Amino Acid Sequence
>chaperone protein HscA
MALLQIAEPGLSPQPHQRRLAVGIDLGTTNSLVAAVRSGLSEPLADAEGQVILPSAVRYHADRVEVGQSAKIAASQDPFNTVLSVKRLMGRGLTDVKQLG EQLPYRFVGGESHMPFIDTVQGPKSPVEVSADILKVLRQRAEASLGGELVGAVITVPAYFDDAQRQATKDAARLAGLNVLRLLNEPTAAAVAYGLDQKAE GVVAIYDLGGGTFDISILRLTGGVFEVLATGGDTALGGDDFDHAIASWIVTDAGLSADIDPSAQRSLLQAACSAKEALTDAESVEVAYGEWRGTLTREAL NALIEPMVARSLKACRRAVRDTGIELEEVEAVVMVGGSTRVPRVREAVAELFGRQPLTEIDPDQVVAIGAAIQADTLAGNKRDGGELLLLDVIPLSLGLE TMGGLMEKVIPRNTTIPVARGQEFTTYKDGQTAMKIHVLQGERELISDCRSLARFELRGIPPMVAGAAKIRVTFQVDADGLLSVSAREMGSGIESSIQVK PSYGLTDDEVTRMLKDSFEYAGDDKVARVLREHQVDAERLLEAVQGALDADGERLLDEEERLVINLQMDELRELMQGTDGYAIEQQAKRLSQVTDAFAAR RLDSTVKAALAGRNLNEIEE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site