Pseudomonas syringae DSM 10604, PSSR_RS0101445
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae DSM 10604 Contig5, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
AGGGCAAGATCGAGCTACAGGCGCAGAGTGATGCGATGGAATTGACCGCGCAGCAGGGAATGAAGATCACCTCGACCGCTGCCGGAATAGAAATCGCCGC ACAGGAAGGCATCCTGCTCACCAGCGGTGGCGGCTATATCCGCATCAAGGACGGCAACATCGAGATTCATGCGCCGGGGACTATTGATGTCAAGGGAGCG AAGAAGACGTTTAGCGGGCCGACCAGTCTGTCGCACAGCTATAACGAGATGCCCAAGACCGACTTCGCGGATCCTTATGTGGTGCGCAAGCAGAGCACTG GAGAGCCCGCTGCAGGTATGAAGGTCGAAGTGACCCGCGCGGATGGGAGTGTCATGCAGTACGTTTCTGATGCCGCAGGGAAGATACCGCTCCAGCAAAG TCAGATTGCAGAATTTGTAAAAATCAAAGTGCTGGGAGAAGCGTAATGCCTGATTCCTCTTTCTTCGTCGCCCAGACAAACCAATGCATGGAGGCCAACC
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| DNA Sequence for Gene |
>PSSR_RS0101445
ATGGGAAATAAAAGCTCACCCTCAACTGACAATACGCTCCATCTGGCTCAGGAACATGATGCAGACGGCGAGCTAATGGCCACTACGACCATGTCACGGT CAAACGACCCAGTGGAAAAGTCTGTTCCGTGTAAAAGCGGGAAAGTTGTGCCAATTATTTTCATACCAGGGGTGATGGGTACTAACCTGATGAATATGAA AACCAGAGAACGGGCTTGGGCGGCGCCAAACATGGATGGAGTATTTCCAGTATTAAAAACGGTAGGACTCCTTCTCGGAAGCTGGTTCAAGTCACCCAAA CGACGTCAACTTGAGCTTGATCCTAGGCCTGGCGCTGTAGGCATCTATGAAGACGGAGAAATTGATGGCGGTGAGAGCGGACTTTCCAAGGAAGAGTTAC GTACTCGAAAGTGGGGCTCCATCATGCGAACCTCATATCACCCAATTATGAACGAAATGCAGCGCCAAATGAACAGCATCATGATAGCTGGCAATCCTCA AGGAGAATGGAAAGAACGTGTACAACAAGCACCTGCGGACTGGGGTGACTGGGAAGAAAATCCAAGCTTATCAGCACTTGGAGATGCAAGCGGCTTGATG AAAGCAGCAGATATTCAATACGAAGTTTGGCCAGCTGGCTATAATTGGTTGCAATCAAACAAAGACTCTGCTGCCGACATAATAAATTACATTAATAAAA CTGTAATACCTCACTACAACGGCAAAGCAGAAAAAGTAATAATTGTCACCCATTCCATGGGAGGACTTGTAGGAAGAGCTATGGTTGCTTGCCGTGGGTT TAGCAAATTGTACGGTATTGTACACGGTGCAATGCCTGCAACTGGCGCCCCCGCGAGCTATAAGCGTGTAAGGGGTGGCTTTGAAGATTTTGGCGAAAAG AAAATATTAAGCAGGGATGCGGCTGACGCTGTAGCAGTTATGGCCTTTGCTCAGGGACTGCTAGAACTACTGCCATCAAGAGACTATAACAACGGACAAC CTTGGCTTTTTTTAAGAGATCGTACTACTGGGAAAAAAGTATTTACTCTTCCGAAAACCTGCCCTTATACGGAGATCTACAAATCCGATAAGTGGTGGGC TCTCATCCCAGATACCAACGACAAACTGCTTGATCCTGCGAAAATAATCGGCACTAAAACCGACGATGATGTTTCGATGGAAAGTAGCGAAGAGAACTCA CTTAAAAATACTTTTTTTGGAATAATAGATTCGGTCAAAAACTTTCACGAAGATATAGAGAATAAGTATTACGACAAAACATATGTACACTATTGCGTAG AGGCAAAATCGGAGAAGTTTTTTACATGGGGCAATCTTGAATGGTCCTCCAAAAGCGTCGAAGGATTAGACCCTGAAACCGCAAGTCTGACCAGTGACAA TCTAGACTCCGAACTACAGCTAAATGGAAAATATGTGTTAACCGTAGGAGAAAAATACCACCCTGGGGATGGAACAGTGCCGGTTTACTCTGGCGCTGCA CCACGTGGAAAGCCAGGGGTAAAAGGAGCCTTCGCTCATGGACAAAATGCAGAAAATGCAGGAAAACTCATCAATTATTGCAAAGAAGGTAAATATAATA ACTCCGTTGGGTACAAGCATCAAAATGCTTATACCGACGAAAAGGGCAGAACACTTTATGCAACCCTATATAGTTTAGTCAGGCTATCAGAAAATAGTTA A
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCATCTAAGGCAGACCATGAAAAACATTCCAACCTTAACAAAAGCGCTAACTTATGCCTTAACAATTTTTGCACTTTACTCTCCACTATCCTTGGCACTA CCCATTGAAGGAAAGGAAATGAACAACAAGCTGGCCACCCATTATTTTGGCAGATTCCAACTAGATCTACCAACGGGTTCTGAAATTGTCGCTGACTACA AGCTCTACAACGAAAAAGTAGAGCTTGTTAGCAAAAATGGAAAGTCTGATTTGAGCTCGTTTGTCGATCAAACAATTGAAGAACTAAAAAAAGGAACTGC TTATGGGACATCAAGCAGATATGAAAAAACTATACCCCTTAGCAATGGTAGCGTGTTAATACTTTCCAAACTAGATAATCTCTATACGTTTCATGCCTAT CTACTTACATCAAAGAACACACTTTATCGGATGCTAGTAAAGTCAATTTCGGCTAAAGGAATAGATGGCGCCATCAATAAAACCCGGCTAATAAGTGAAT
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| Amino Acid Sequence |
>hypothetical protein
MGNKSSPSTDNTLHLAQEHDADGELMATTTMSRSNDPVEKSVPCKSGKVVPIIFIPGVMGTNLMNMKTRERAWAAPNMDGVFPVLKTVGLLLGSWFKSPK RRQLELDPRPGAVGIYEDGEIDGGESGLSKEELRTRKWGSIMRTSYHPIMNEMQRQMNSIMIAGNPQGEWKERVQQAPADWGDWEENPSLSALGDASGLM KAADIQYEVWPAGYNWLQSNKDSAADIINYINKTVIPHYNGKAEKVIIVTHSMGGLVGRAMVACRGFSKLYGIVHGAMPATGAPASYKRVRGGFEDFGEK KILSRDAADAVAVMAFAQGLLELLPSRDYNNGQPWLFLRDRTTGKKVFTLPKTCPYTEIYKSDKWWALIPDTNDKLLDPAKIIGTKTDDDVSMESSEENS LKNTFFGIIDSVKNFHEDIENKYYDKTYVHYCVEAKSEKFFTWGNLEWSSKSVEGLDPETASLTSDNLDSELQLNGKYVLTVGEKYHPGDGTVPVYSGAA PRGKPGVKGAFAHGQNAENAGKLINYCKEGKYNNSVGYKHQNAYTDEKGRTLYATLYSLVRLSENS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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