Pseudomonas syringae DSM 10604, PSSR_RS0100665
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae DSM 10604 Contig1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CGCTTCGGCCTCGGCGGTAATCGCCGGGACTTCGCTGCGATCCTTGAAGTGATTGATCTTCGGGGTACCGCCAACAAACGACCAGAGCAGAGCGACCGGG TCTTCCAGCGCCAGCCAGGCCCGCGCATTGGTGCGCACGGCCTTGAGCTTGAGGCGGTTGCGGATAATGCTCGGATCGAGCATCAGCGCCTCTATTTCGG CATCGCTCAGCTGCGCCAGGCGCTCAACGTCAAAACCGTGCAGCACTTCGCGATAACGCGCCCGCCGCTTGAGAATCGTGATCCACGACAGCCCGGCCTG GAACCCTTCGAGCAAAAGCAACTCGAAGAGCTTCTGCGCATCGCGCAGCGGCACTCCCCACTCCTGATCGTGATATGCGATGTACAGGGGGTCTTCGTTG CACCAAAAGCAGCGTGTCATAGGGCTCCCAACGAGTGGACGTGCGGCCGAATCGGGTATACTCCCGCTCTTTGAATCGCAGCCCAGCACAGGTGAAATTT
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| DNA Sequence for Gene |
>PSSR_RS0100665
GTGAGCCAGCCTACGCCAGCCGTGCGTACCTTCCAAGACTTGATCCTCGCCCTCCAGCAATACTGGGCAGAACAAGGTTGCGTGGTACTTCAGCCCTACG ATATGGAAGTAGGCGCCGGCACGTTCCACACTGCCACGTTTCTGCGCGCCGTAGGCCCGGAAACCTGGAACGCCGCTTACGTACAGCCAAGCCGTCGCCC GACTGACGGCCGCTACGGCGAAAACCCGAACCGCCTGCAGCACTATTACCAGTTTCAGGTGATTCTCAAGCCGAATCCGGACAACTTCCAGGAACTGTAC CTGGGCTCGCTCAAGCACATCGGCCTCGATCCGCTGGTGCACGACGTGCGCTTCGTCGAAGACAACTGGGAATCGCCGACGCTGGGCGCCTGGGGTCTGG GCTGGGAGATCTGGCTCAACGGCATGGAAGTCTCGCAGTTCACCTACTTCCAGCAGGTCGGTGGTCTGGAGTGCTACCCGGTCACCGGCGAAATCACCTA CGGCCTTGAGCGTCTGGCGATGTACCAGCAGGGCGTGGACTCGGTCTACGATCTGGTCTGGGCTGACGGCCCGTTCGGCAAAGTGACCTACGGCGACGTG TTCCACCAGAACGAGGTGGAGCAGTCGACCTACAACTTCGAACACGCCAACGTCGACAAGCTGTTCGAGCTGTTCGACTTCTACGAAAGCGAAGCCGCAC GCCTGATCGAGCTGGAGCTGCCATTGCCTGGCTACGAAATGGTCCTCAAGGCCTCACACACCTTCAACCTGCTGGATGCCCGTCGCGCGATTTCCGTGAC GGCACGTCAGCAATACATCCTGCGCGTACGCACGCTGGCCCGCTCGGTGGCTCAGGCCTACCTGCAGGCCCGGGCCCGTCTCGGCTTCCCGATGGCGCCG CCCGATCTACGCGATGAAGTGTTGGCCAAGCTGGAGGCAGCGCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTGCTCAAGATTTTCTGGTCGAACTGGGCACCGAAGAACTGCCACCCAAGACCCTCGTCTCACTGGCCGATGCATTTCTCGCCGGCATTGAAAAAGGCCT CGCTGGCGCAGGTCTGACCTACAGCGCCAAACAGGTCTACGCCGCACCGCGTCGTCTGGCCGTGCTGATTACCGCACTGGCCACGCAACAACCGGATCGC AGCGTCAACCTCGACGGCCCGCCGCGTCAGGCAGCGTTCGATGCCGACGGTAATCCGACTCAGGCCGCCCTGGGCTTCGCCAAGAAGTGCGGCGTCGACC TGAGCGAAATCGATCAGAGCGGCCCGAAACTGCGTTACAGCCAGACCATCCTCGGCAAGCCGACGACGTCCCTGTTGCCGACCATCGTCGAAGACTCGCT GAACGACCTGCCGATCGCCAAGCGCATGCGCTGGGGGGCTCGCAAGGAAGAGTTCGTGCGGCCGACCCAGTGGCTGGTGATGCTGTTTGGTGATCAGGTA
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| Amino Acid Sequence |
>glycyl-tRNA synthetase
MSQPTPAVRTFQDLILALQQYWAEQGCVVLQPYDMEVGAGTFHTATFLRAVGPETWNAAYVQPSRRPTDGRYGENPNRLQHYYQFQVILKPNPDNFQELY LGSLKHIGLDPLVHDVRFVEDNWESPTLGAWGLGWEIWLNGMEVSQFTYFQQVGGLECYPVTGEITYGLERLAMYQQGVDSVYDLVWADGPFGKVTYGDV FHQNEVEQSTYNFEHANVDKLFELFDFYESEAARLIELELPLPGYEMVLKASHTFNLLDARRAISVTARQQYILRVRTLARSVAQAYLQARARLGFPMAP PDLRDEVLAKLEAAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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