Pseudomonas syringae DSM 10604, PSSR_RS0100375
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae DSM 10604 Contig1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGATATCGGTGGCGACCTGATCATTGCGGCTGCGACCGGTGTGCAGCTTCTTGCCGGTGATACCGATGCGGTCGGTCAGGCGTGCTTCAATGTTCATGTG CACGTCTTCCAGATCGACGCGCCAGTCGAACTGGCCAGCCTCGATCTCGGCCTGAATGGTGTTCAGGCCGTCAACGATGGTATCGCGCTCGGCGTCGGTC AGTACGCCCACCTTGGCCAGCATTGTGGCGTGGGCGATGGAGCCCATGATGTCGTGGCGATACAGGCGTTGATCGAAGGTGACGGAGGCGGTGAAACGCG CGACAAACGCGTCGACGGGTTCACTGAAGCGGCCGCCCCAGGACTGGTTGGTCTTGTCGGTGCTCATGGATTCGCTCGTTGCTGACTGAAAGTGACGTGC CCGATACCTGGCACAAGAACGAACGCGATGATAACAGGGTTGATGCATTTTTATCCCCGGACAGCTTGCCGCTGACGAGGCCAGGGCAGAGACTGGAGCC
|
|
| DNA Sequence for Gene |
>PSSR_RS0100375
ATGCGAATCGAACCTGTGAAACACGATGCCCGGCCCGCGCCCGGCAAAGACTTTTTCCTCCCTGAACTGTGCCTGCCGCAGGCATTGCTGGTGCTCGTCG TGCTGGCGGAGCTGCTGGTTCTGGTTCTGGTGCTGGTAGAACCGATGCGCAGCGGCTTCGACTGGGTACGCCTGGCGTTGATGTCGCTGTTTGTGCAATG GATCGTGCTACTGTCCGCAGCGCTGCTGTGCGGGTTGCGGCCTTGGCTGGCGCGATTGACGCCGGGCCTGGCGGGCATGCTCAGCTGCCTTTTGGTGGTC GGCTTGACGCTGCTGTGCACAGCCGTCACCGATGTCTGTCAGCTTACCGGGCGAATTTCGGTCAGCGGCATGGTCGAGCGTTATCTGCGCTACTCGACGA TTGCCCTGATCATGTCCGCTCTGATGCTGCGCTACTTTTATCTGCAGAGTCAGTGGCGCAAGCAGCAACAGGGCGAACTGCGCGCCAGGATCGAATCGCT GCAGGCGCGCATCCGCCCGCATTTCCTCTTCAACACACTCAACAGTATCGCCAGTCTGGTGGCCAGCAACCCGGTCAAGGCCGAGCAGGCGGTGCTGGAT CTTTCGGACCTGTTTCGCGCCAGTCTGGCCAAGCCGGGCAGCCTGGTGACATGGGGTGAAGAGCTGGCATTGGCAAAACGATATTTATCGATTGAGCAAT ATCGTCTTGGCGAGCGTCTACAGTTGGACTGGAGGGTGAGTGCAATTCCCGATGACTTGCCAATCCCCCAGCTAACCTTGCAGCCATTACTTGAAAACGC TTTGATTTATGGCATTGCTCCGCGGGTTGAAGGGGGCGTTGTAACAGTCGAAGCGAACTATGAAGGGGGAGAGTTCATATTGAGCGTCAGCAATCCCTAT GAAGAAGTTGCCAATCGGCAGACTTCCAACGGTACTCAGCAAGCTCTGACGAATATAGGCGCACGAATTGCGGCACTTTTTGGCCCGCATGCCAGTCTGA GCGTGGAGCGCCGTGACGGTCGTCACTACACCTGTCTACGCTATCCTTGTGCGAGACTCACGCAGGAAGCCAGAGCTATATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ATGTCCTGATCGTTGATGACGAACCCCTGGCCCGCGAGCGATTGAGCCGCATGGTCAATGAAATCGAGGGTTATCGAGTACTGGAACCCAGCGCTTCCAA TGGCGAAGAAGCCTTGGCGCTGATCGAAACCCACAAACCGGACGTAGTGCTGCTCGATATCCGCATGCCGGGTCTCGATGGCCTGCAGGTCGCAGCGCGA CTGTGCGAGCGCGAAGCACCGCCTGCAGTGGTCTTTTGCACCGCCCATGATGAGTTCGCCCTGGAAGCTTTCCAGGTCAGTGCGGTCGGCTATCTGGTCA AGCCAGTGCGTCCCGAGCACCTTATCGATGCGTTGAAAAAGGCCGAGCGGCCAAACCGCGTGCAACTGGCGGCGTTGACCCGCCCGGCTGCCGAAAGCGG ATCGGGCCCACGCAGCCACATCAGCGCGCGTACCCGCAAAGGCATCGAGCTGATTCCCCTGGATCAGGTGATCTACTTTATCGCCGATCACAAGTACGTG
|
|
| Amino Acid Sequence |
>alginate O-acetyltransferase
MRIEPVKHDARPAPGKDFFLPELCLPQALLVLVVLAELLVLVLVLVEPMRSGFDWVRLALMSLFVQWIVLLSAALLCGLRPWLARLTPGLAGMLSCLLVV GLTLLCTAVTDVCQLTGRISVSGMVERYLRYSTIALIMSALMLRYFYLQSQWRKQQQGELRARIESLQARIRPHFLFNTLNSIASLVASNPVKAEQAVLD LSDLFRASLAKPGSLVTWGEELALAKRYLSIEQYRLGERLQLDWRVSAIPDDLPIPQLTLQPLLENALIYGIAPRVEGGVVTVEANYEGGEFILSVSNPY EEVANRQTSNGTQQALTNIGARIAALFGPHASLSVERRDGRHYTCLRYPCARLTQEARAI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|