Pseudomonas sp. URHB0015, N526_RS0128245
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URHB0015 N526DRAFT_scaffold00017.17, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GACGTTGGTTTCCTCGGCGCCGCGCAGGTTGACCGTTTCGGCAACATCAACACCACAGTGGTCGGTGACTATCACCAGCCAAAAGTCCGTCTGCCAGGCG CGGGCGGGGCACCGGAGATCGCCGGTTCGGCGAAAAGCGTGCTGATCATTCTCAAGCAGTCGGCGCGCTCGTTTGTCGACAAGCTGGACTTCATTACCTC AGTCGGCCACGGCGAAGGCGGCGATTCGCGTAAACGCCTGGGGCTGCCAGGTGCCGGTCCGGTGGGGATCATCACCGACCTGTGCATCATGGAGCCGGAA GCCGGCACCCACGAGTTCGTGGTCACCGCACTGCACCCGGGCGTGACCCGCGAGCAAGTGGTTGCTGCTACGGGCTGGCCAGTGCGCTTCGCCGATCAGG TGGAGTTCACCGCCGAGCCGACCGAGGCAGAGCTGCTTGCCTTGCGCGATCTGGAAGCGCGCACCGCTGCCGCCCACGGCCAGGCACCGGGAGAAGCATG
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| DNA Sequence for Gene |
>N526_RS0128245
ATGCGTGACGTTTATATCTGCGATGCAATTCGCACTCCGATCGGCCGCTTTGGCGGTGGCCTTTCGGCGGTGCGTGCCGACGACCTGGCGGCTGTGCCGA TCAAGGCCCTGATCGAGCGCAACCCGGGCGTCGACTGGACTGCCGTGGACGAAGTGTTCCTCGGCTGCGCCAACCAGGCTGGCGAAGACAACCGTAACGT GGCACGCATGGCGCTGTTGTTGGCCGGTCTGCCGGAGAGCATTCCCGGGGTGACCCTCAACCGTCTGTGCGCTTCCGGCATGGATGCGATTGGCACGGCG TTCCGCGCCATTGCCAGCGGTGAAATGGAACTGGCGATTGCCGGCGGCGTCGAGTCGATGTCCCGTGCACCGTTCGTGATGGGTAAGGCCGACGCAGCGT TCTCGCGCAACATGAAGCTGGAAGACACCACCATTGGCTGGCGTTTCATCAACCCGTTGATGAAAGCCCAGTACGGGGTCGATGCGATGCCGCAGACCGC CGACAACGTCGCCGATGATTACGCGGTATCGCGCGCCGACCAGGACGCCTTTGCCCTGCGCAGCCAGCAACGTACTGCAGCGGCGCAAGCGGCTGGCTTC TTCGCCGAGGAAATTGTCCCGGTGCGCATCGCCCACAAAAAAGGCGAAAGCGTGGTGGAGCAGGACGAGCATCCGCGTGCCGACACCAGCCTGGAAACCC TGAGCAAACTCAAACCGGTCAACGGCCCGGACAAGACCGTCACCGCTGGCAACGCCTCGGGCGTTAACGACGGGGCTGCGGCATTGATCCTGGCCTCCGC CGAGGCGGTGAAGAAGCACGGTCTGACCGCTCGCGCGAAAGTGCTGGGCATGGCCAGCGCCGGCGTTGCTCCACGTGTCATGGGCATTGGCCCGGTGCCG GCAGTGCGCAAGCTGGTGGAACGCCTGGGTGTGTCGGTCAATGATTTCGACGTGATCGAACTCAACGAAGCCTTCGCCAGCCAGGGCCTCGCGGTGTTGC GCGAACTCGGCCTGGCGGACGACGCGCCACAGGTCAACCCGAACGGCGGCGCCATTGCCCTCGGGCACCCGCTGGGCATGAGTGGTGCACGTTTGGTGCT GACTGCCTTGCATCAACTGGAGAAAACCGGTGGCCGTAAGGGCCTGGCGACCATGTGTGTAGGTGTAGGCCAAGGCCTGGCACTGGCGATCGAAAGGGTT TAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCACACCCTCCATCACCTGTAGGAGCGAGCCTGCTCGCGAAGAACGTCAACGATAACGCACGTTATCTGAGGCAACGCGGCGAATTCTTCGCGGGCAAG CCCGCTCCCACAGTGAGCAGCGTCGCCTACAGGTTTCTGCGGAACGGGACTGTTGCAAAGTGTGTCTAGACTCTCACTGTCCCCATCGAGTGAATAACCA TGACATCAATCACCAGCCACTACACCGCTGAAGAGCGTGGCAAGAGGATCTTCGCAATTGTCGGGGCATCTTCCGGCAATCTCGTCGAATGGTTCGACTT CTATGTATACGCCTTCTGCGCGATCTACTTCGCCCCAGCCTTCTTTCCCTCCGACGATCCGACCGTGCAATTGGTCAACACCGCTGGTGTGTTTGCCGCC GGTTTTTTGATGCGACCCATCGGTGGCTGGCTGTTCGGCCGGGTGGCCGACAAGCACGGGCGCAAGAATTCGATGATGATTTCGGTGCTGATGATGTGCG
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| Amino Acid Sequence |
>beta-ketoadipyl CoA thiolase
MRDVYICDAIRTPIGRFGGGLSAVRADDLAAVPIKALIERNPGVDWTAVDEVFLGCANQAGEDNRNVARMALLLAGLPESIPGVTLNRLCASGMDAIGTA FRAIASGEMELAIAGGVESMSRAPFVMGKADAAFSRNMKLEDTTIGWRFINPLMKAQYGVDAMPQTADNVADDYAVSRADQDAFALRSQQRTAAAQAAGF FAEEIVPVRIAHKKGESVVEQDEHPRADTSLETLSKLKPVNGPDKTVTAGNASGVNDGAAALILASAEAVKKHGLTARAKVLGMASAGVAPRVMGIGPVP AVRKLVERLGVSVNDFDVIELNEAFASQGLAVLRELGLADDAPQVNPNGGAIALGHPLGMSGARLVLTALHQLEKTGGRKGLATMCVGVGQGLALAIERV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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