Pseudomonas sp. URHB0015, N526_RS0127475 (fliN)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URHB0015 N526DRAFT_scaffold00015.15, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTTTGAGTACATCAACTCGGAAGTGAACCCGGCCATGGCCAATATCGTCGGCCCCAGCGAAGCCGTGGTGGTGTCTACCTTCCACATCGAACTCGATGGC GGTGGCGGCGACCTGCACGTGACCATGCCGTACTCGATGATCGAGCCGGTGCGCGAAATGCTCGATGCCGGTTTCCAGTCCGATCTGGACGACCAGGACG AACGCTGGGTCAACGCCCTGCGCCAAGACGTGATGGACGTCGATGTGCCGCTCAGCGCCACCGTCGCCCGTCGTCAATTGCGCCTGCGCGACATCCTGCA CATGCAGCCGGGTGACGTGATCCCGGTCGACCTGCCGGAAGACATGATCATGCGCGCCAATGGCGTGCCGGCCTTCAAGGTCAAGATGGGTTCGCACAAG GGCAACCTCGCGTTGCAAGTGATCGAGCCGATCGAGCGCCGCTGAGCGGCGTTGTTGTGTATTCGCCTTTAAATGATGGTTGCCCCGCCGAGGACAAATG
DNA Sequence for Gene
>N526_RS0127475 |fliN
ATGGTTAACGATATGAATTCCCAGGACGACCAGGCCCTGGCTGATGAGTGGGCTGCCGCGCTGGAAGAAGCCGGTGACGTTGGCCAGGATGATATCGACG CGCTGCTGGCCGCCGACGCTGCCGGCTCACCGTCCAATCGCCTGCCAATGGAAGAATTCGGCAGTGCGCCGAAGAACAACGGTCCGGTGACCCTCGACGG TCCCAACTTGGACGTGATCCTCGATATCCCGGTGTCGATCTCGATGGAAGTCGGCAGCACCGATATCAACATCCGCAACCTGCTGCAGCTCAACCAGGGC TCGGTGATCGAGCTCGATCGCCTGGCCGGCGAGCCGCTCGACGTGCTGGTCAACGGCACACTGATTGCCCACGGCGAAGTGGTGGTGGTCAACGAAAAGT TCGGCATCCGCCTGACTGACGTGATCAGCCCGAGCGAACGCATCAAGAAGCTGCGCTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGAAAAAACTCCTCGGTGTAGTGCTGGCGCTGCCGTCCGCGGTGATGGCGGCCGAGCCTGTGGCAGCGGTCGCCGCACCTGCTGTCGGCAGCGGCGTGG CCGGTCAGTTGACCCAGTTGGTGCTGGGTTTGTTGCTGGTGCTGGGGCTGATCTTCCTGCTCGCCTGGCTACTGCGCCGAGTGCAGCAGGCTGGCCCGGC GGGCAAGGGGCAGGTGATTGAGCTGATCGGCTCGCGCGCGCTCGGTCCGCGTGATCGGCTGGTGCTGGTGCAGGTCGGCAACGAGCAGGTGCTGCTGGGG TTGACCCCGGGCACCATCACCGCGCTGCACGTGCTCAAGGAGCCGGTACAGGTGCCGAGCACCGAGCCGGCGACCCCGGAGTTTGCCCAGCGCCTGATGG AGTTGCTGGGTAAAGACAAGGATAAGAAGTAATGCCCGTGCGTTTTCTCCTGACGCTTTTGCTGATGCTGACCGCGCCCCTGGCGCTGGCGGCCGACCCG
Amino Acid Sequence
>flagellar motor switch protein
MVNDMNSQDDQALADEWAAALEEAGDVGQDDIDALLAADAAGSPSNRLPMEEFGSAPKNNGPVTLDGPNLDVILDIPVSISMEVGSTDINIRNLLQLNQG SVIELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPSERIKKLR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site