Strain | Pseudomonas sp. URHB0015 N526DRAFT_scaffold00004.4, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTCACCACAGGAGGTGCCCCATGCACAGTTCAGATCGTATCGAAAGAAAGATCCTGCTCAAGGTACCGCGTTCGACCGTGTGGCGGGTGGTGGCCAACGC TGAAGCCTTCGGTCAGTGGTTTGGCGTGGCGTTAGAGGGCCAGCGTTTTGTCGCTGGCGAGCGCACTCAGGGGCAGATTACCTTTAAGGGTTACGAACAT CTGTTGTGGGATGTCCAGGTCATGCGGGTCGAGCCGGAGCGGGTATTTGCCTTTCGCTGGCACCCTTATGCGGTGGACCCGAACATCGACTACTCCAACG AGCCCACCACCCTGGTGCTGTTCGAGTTGGAGGACAGGGAGGGCGGCACTTTGCTGAAAGTCGTGGAGTCCGGCTTTGATAACATTCCCGAAAGCCGTCG CCTCAAGGCGTTTCGCATGAACAGTCGCGGCTGGGATGAGCAAATGAGCAACATCGAGAAGTACCTTGACCAATTCTGACCCCACCGTTTCGAGCACTGA
|
|
DNA Sequence for Gene |
>N526_RS0125800
ATGTTTGAGCCGTATCTGAGTCAATGGCAACTGCAGGCCGATGGCGCGCCGATCATCACCCTGGGCAGCCGCCTGTTACCGGTGCGCTACCAGGGCAAGC CGGCAATGCTGAAGATCGCCTTGAATGATGAAGAAAAGTTCGGCAACCGGTTGATGGTCTGGTGGCGTGGCGACGGCGCGGCGCGGGTGTATGCCCATGA CGGCGACGGATTGCTGATGGAGCGCGCCGAGGGTCAGCGGTCGTTGCTGCACATGGCCCAGCACGGCGAGGACGACGAGGCCAGCCGAATCATCTGTACC GCCGTGGCACGCCTGCATCTTCCGCGCTCGTCGCCCTTGCCGCCGCTGGCAAGCATGAAGCACTGGTTTCGCTCACTGCCACCGGCCGCTGCCAGCCATG GCGGGCTGCTGCGCCAGAGCCTGGCCAGCGCCGAGTATCTGCTCGCCACGCCGCAGGACATCGTCGTACTGCATGGCGACGTACATCACAATAATATCCT CGATTTCGCCGAGCGCGGCTGGCTGGCCATTGATCCCAAGCAGGTCACCGGTGAGCGCACCTTCGACTACGCCAACCTGATCTGCAACCCCGACTTGCCC AGCGCCAGGGACCCACTGCGGTTTACCCGGCAAGTGGCGCTGGTGTCGGAGCTTGCAGGGTTGCAACCTCGGCGCCTGTTGCAATGGGTGTTGGCGTTTG CCGGATTGTCCGCCGCGTGGTTTCTTGAAGATGACGATCGGCAGGCGGCGGACGCTCAGCTGGAGGTCGCCGGACTCGCTGCGCGGGCATTGGACGCCGG ATCAGCCACCGGCAACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
CGCAGCCAGCTATGGCGAATGTCTTACACGCGCTGGTAGCAATGTCTTCTATTGCAGATTGGATCCGATGCGTAATCTACACCCATCAACTGAGCACAGG ATGTACTCAGGATCATGGATGATCGGCCATTTGCAGGGAGTGCAGCGACAGGATGTCGTCATGGTCTTGAAAAACCCGCTTCGGCGGGTTTTTTTATGGC CGCGATAATCAGCTGCGGACGCTGGCAAGTCGCGCCGCCGCCCGTTCGGTAACCAGCGTGCGCTGCTTGAGCGAGTCGGCAGCCTTTAGCTTTGCCTGCT GCAGGACAGAAGCAGGGGCCGTGCGCGGATCGCCCGAGGCAAACGGCGGTGCCGGCGCGTACTCGAGTTGCAACTGCACCAACTGCGCGACGTCATCGCC ATACAACTCGGCCGCCAGGTTCAACGCGAAGTCGATACCGGCGGTGATCCCGCCGCCGGTCAGCAGGTTGCCGTCGCGCACCACACGCTCCTGAACCGGG
|
|
Amino Acid Sequence |
>3'-kinase
MFEPYLSQWQLQADGAPIITLGSRLLPVRYQGKPAMLKIALNDEEKFGNRLMVWWRGDGAARVYAHDGDGLLMERAEGQRSLLHMAQHGEDDEASRIICT AVARLHLPRSSPLPPLASMKHWFRSLPPAAASHGGLLRQSLASAEYLLATPQDIVVLHGDVHHNNILDFAERGWLAIDPKQVTGERTFDYANLICNPDLP SARDPLRFTRQVALVSELAGLQPRRLLQWVLAFAGLSAAWFLEDDDRQAADAQLEVAGLAARALDAGSATGN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|