Pseudomonas sp. URHB0015, N526_RS0123430
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0000160 | phosphorelay signal transduction system |
Inferred from Sequence Model
Term mapped from: InterPro:PF00072
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF13487 | HD domain | - | - | 236 | 306 | 6.2E-18 |
| CDD | cd19920 | REC_PA4781-like | - | - | 13 | 115 | 2.65952E-48 |
| CDD | cd00077 | HDc | IPR003607 | HD/PDEase domain | 177 | 322 | 1.83445E-17 |
| Gene3D | G3DSA:1.10.3210.10 | Hypothetical protein af1432 | - | - | 156 | 368 | 6.1E-80 |
| SUPERFAMILY | SSF52172 | CheY-like | IPR011006 | CheY-like superfamily | 9 | 157 | 3.56E-37 |
| SMART | SM00448 | REC_2 | IPR001789 | Signal transduction response regulator, receiver domain | 11 | 124 | 2.3E-37 |
| Coils | Coil | Coil | - | - | 127 | 154 | - |
| PANTHER | PTHR45228 | CYCLIC DI-GMP PHOSPHODIESTERASE TM_0186-RELATED | - | - | 8 | 371 | 1.0E-106 |
| Gene3D | G3DSA:3.40.50.2300 | - | - | - | 11 | 155 | 3.3E-36 |
| Pfam | PF00072 | Response regulator receiver domain | IPR001789 | Signal transduction response regulator, receiver domain | 13 | 124 | 1.1E-25 |
| SUPERFAMILY | SSF109604 | HD-domain/PDEase-like | - | - | 160 | 353 | 2.32E-32 |
| SMART | SM00471 | hd_13 | IPR003607 | HD/PDEase domain | 173 | 324 | 2.5E-9 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.