Pseudomonas sp. URHB0015, N526_RS0118350 (carB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URHB0015 N526DRAFT_scaffold00018.18_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GATCCAGGCGATCAAGGAAGTGCTCGAGACCGAGATTCCGGTATTCGGCATCTGCCTGGGTCACCAATTGCTGGCCCTGGCGTCTGGCGCCAAGACCCTG AAAATGGGCCACGGCCACCACGGTGCCAACCACCCGGTGCAGGACCTGGATTCCGGTGTGGTGATGATCACCAGCCAGAACCACGGTTTCGCCGTGGATG AAGAAACCCTGCCGGCCAACGTGCGAGCGATCCACAAATCGCTGTTCGACGGCACCCTGCAAGGTATCGAGCGTACCGACAAGAGCGCCTTCAGCTTCCA GGGTCACCCTGAAGCCAGCCCTGGCCCGAACGACGTGGCGCCGCTGTTCGATCGCTTCATCAACGAGATGGCCAAGCGACGCTGATCGCTGGCCTTGATG GAATGAAGCTTGAGGGCGGTCCCGACAACGGCGGCCCCCTCAAGTCAAAGATTGAACAAGACGGCTTGCCGACTGACCTGCGGATTTGAGTGACAAACCC
DNA Sequence for Gene
>N526_RS0118350 |carB
ATGCCAAAACGTACAGACATTAAAAGCATCCTGATTCTCGGCGCTGGCCCGATCGTGATCGGCCAGGCCTGCGAATTCGACTACTCCGGCGCCCAGGCTT GCAAAGCCCTGCGCGAAGAGGGTTACCGCGTCATCCTGGTGAACTCCAACCCGGCCACCATCATGACCGACCCGGCCATGGCCGACGCCACCTACATCGA ACCGATCAAATGGCAGACCGTTGCCAAGATCATCGAGAAAGAGCGTCCGGACGCACTGCTGCCGACCATGGGTGGTCAGACCGCTCTGAACTGCGCCCTG GACCTGGAGCGCGAAGGCGTCCTGGAGAAGTTCGGCGTAGAGATGATCGGTGCCAATGCCGACACCATCGACAAGGCTGAAGACCGTTCGCGTTTCGACA AGGCGATGAAATCCATCGGCCTGGCGTGCCCGCGTTCCGGTATCGCCCACAGCATGGAAGAAGCCAATGCGGTCCTCGAGACCCTGGGCTTCCCGTGCAT CATCCGTCCGTCCTTTACCATGGGCGGCACCGGTGGTGGTATCGCCTACAACCGTGAAGAATTCGAAGAAATCTGCTCCCGCGGCCTCGACCTGTCGCCG ACCAAAGAGCTGCTGATCGACGAATCGCTGATCGGCTGGAAAGAATATGAGATGGAAGTTGTCCGCGACAAAAAGGACAACTGCATCATCGTCTGCTCGA TCGAAAACTTCGACCCGATGGGCGTGCACACCGGTGACTCGATCACCGTGGCTCCGGCACAGACCCTGACCGACAAGGAATACCAGATCCTGCGTAACGC CTCGTTGGCGGTATTGCGCGAGATCGGCGTCGAGACTGGCGGTTCCAACGTGCAGTTCGGTATCTGCCCGGACACCGGCCGCATGGTCGTGATCGAGATG AACCCGCGTGTATCGCGTTCCTCGGCCCTGGCTTCGAAAGCCACCGGCTTCCCGATCGCCAAGGTCGCGGCCAAGCTGGCCGTGGGTTATACCCTTGATG AGCTGTCGAACGACATCACCGGCGGCAAGACTCCGGCGTCCTTCGAGCCGTCGATCGACTACGTCGTGACCAAGCTGCCACGTTTCGCCTTCGAGAAATT CGCCAAGGCTGACGCGCGCCTGACCACCCAGATGAAGTCGGTGGGCGAAGTCATGGCCATCGGCCGGACCTTCCAAGAATCCCTGCAGAAAGCCCTGCGT GGCCTGGAAGTGGGTGTTTGCGGCCTGGATGAGAAGCTCGATCTGAAAAACCCGGAAAGCATGAGCGTGCTCAAGCGCGAACTGACCGTGCCGGGCGCCG AGCGTATCTGGTACGTGGCGGATGCCTTCCGTGCCGGCATGACGGTCGAGCAGATCTTCGGCATGAACATGATCGACCCTTGGTTCCTGGTGCAGATCGA AGACCTGATCAAGGAAGAAGAGAAGGTCAAGACCATGGGTCTGTCGGCCATCGACCGCGACCTGATGTTCCGTCTCAAGCGCAAAGGCTTCTCGGACATG CGTCTGGCCAAGTTGCTGGGTGTAACCGAGAAGAGCCTGCGTGCTCACCGTCACAAGCTGGAAATCTTCCCGGTCTACAAGCGCGTCGACACCTGCGCGG CCGAGTTCGCCACCGACACCGCCTACCTGTACTCGACCTACGAGGAAGAGTGCGAAGCAGCGCCGTCGGGTCGCGACAAGATCATGATCCTGGGTGGCGG TCCTAACCGTATCGGCCAGGGTATCGAGTTCGACTACTGCTGCGTGCACGCGGCACTGGCGCTGCGCGATGACGGTTACGAGACCATCATGGTCAACTGC AACCCGGAAACCGTCTCCACCGACTACGACACCTCCGATCGCCTGTACTTCGAACCAGTGACCCTGGAAGACGTGCTGGAAATCGTCCGCGTCGAGAAGC CGAAAGGCGTGATCGTCCAGTACGGCGGCCAGACCCCGCTGAAACTGGCGCGTGCCCTGGAAGCCGCTGGCGTGCCGATCATCGGTACCAGCCCTGACGC GATCGACCGTGCCGAAGACCGTGAGCGCTTCCAGCAGATGGTTCAGCGCCTGAACTTGCGTCAGCCGCCAAATGCCACTGTGCGCAGCGAAGACGAAGCG ATTCGTGCCGCCAGCAAGATCGGTTACCCGCTGGTGGTCCGTCCGTCCTATGTACTGGGCGGCCGTGCGATGGAAATCGTTTACGAAGAGGAAGAGCTCA AGCGCTATCTGCGTGAAGCAGTGCAAGTGTCCAACGACAGCCCGGTGCTGCTGGACCACTTCCTCAACTGCGCCATCGAAATGGACGTCGATGCGGTCTG CGACGGCAAAGATGTTGTGATCGGCGCGATCATGCAGCACATCGAGCAGGCCGGTGTTCACTCCGGTGACTCCGCATGCTCGCTGCCGCCGTACTCGCTG CCGGCGCACATCCAGGACGAGATGCGTGAGCAGGTCAAGAAAATGGCCCTGGAACTGGGTGTTGTCGGCCTGATGAACGTGCAGTTGGCGCTGCAAGGCG ACGACATCTACGTCATCGAAGTCAATCCGCGCGCTTCCCGTACTGTGCCGTTCGTGTCCAAGTGCATCGGTGTTTCCCTGGCAATGATCGCGGCTCGCGT CATGGCCGGTAAGACCTTGAAGGAAATCGGCTTCACCAAGGAAATCATCCCGAACTTCTACAGCGTGAAAGAGGCGGTGTTCCCGTTCGCCAAATTCCCT GGCGTTGACCCGATCCTCGGCCCAGAGATGAAGTCGACCGGTGAAGTGATGGGCGTGGGCGACACCTTCGGTGAAGCATTCGCCAAGGCCCAGATGGGCG CCAGCGAAGTGCTGCCGACCGGCGGTACTGCGTTTATCAGCGTTCGCGATGATGACAAGCCGCTGGTTGCCGGTGTTGCGCGTGACCTGATCAGCCTCGG CTTCGAAGTGGTTGCGACCGCGGGTACTGCCAAGCTGATCGAAGCTGCCGGCCTGAAAGTCCGTCGTGTGAACAAGGTGACCGAAGGTCGTCCGCACGTG GTCGACATGATCAAGAATGACGAAGTCACCCTGATCATCAACACCACCGAAGGCCGTCAGTCGATCGCTGACTCCTATTCCATTCGTCGCAACGCCTTGC AGCATAAGATCTACTGCACCACCACCATTGCTGCTGGCGAAGCGATCTGCGAAGCCCTGAAGTTCGGTCCCGAGAAGACCGTGCGTCGCTTGCAGGATCT GCATGCAGGATTGAAGGCATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCAAATACCCAATGACCGTCCAGGGCGCCAAAGCCCTGGAAGAGGAGCACGCCCATCTGACCAAGGTCGTTCGTCCGAAGCTGAGCCAGGACATCGGAAC GGCCCGCGAGTTGGGCGACTTGAAGGAAAACGCCGAATACCACGCTGCTCGCGAGCAGCAGGGTATGGTCGAGGCGCGGATTCGTGACATTGAAGGCCGG ATTCAGAATCAGGTCATTATCGACGTCACGACCATTCCTCACACCGGCAAAGTGATCTTCGGCACCACCGTCGAAATCGCCAACGTCGAGACTGATGAAA GCGTCACTTACCACATCGTGGGTGAGGATGAAGCTGACTTCAAACTCGGCAAGATTTCCGTCGGCTCCCCCCTGGCCCGTGCTTTGATCGGCAAGGAAGA GGGTGATGTGGTTGCGGTGAAAACGCCAAGTGGCGTTATCGAGTACGAGATTGTTGAAGTCCGCCATATCTGAAGGCTGGCGCTCGCTTCGTGCGGGCGC
Amino Acid Sequence
>carbamoyl phosphate synthase large subunit
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPAMADATYIEPIKWQTVAKIIEKERPDALLPTMGGQTALNCAL DLEREGVLEKFGVEMIGANADTIDKAEDRSRFDKAMKSIGLACPRSGIAHSMEEANAVLETLGFPCIIRPSFTMGGTGGGIAYNREEFEEICSRGLDLSP TKELLIDESLIGWKEYEMEVVRDKKDNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDKEYQILRNASLAVLREIGVETGGSNVQFGICPDTGRMVVIEM NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELSNDITGGKTPASFEPSIDYVVTKLPRFAFEKFAKADARLTTQMKSVGEVMAIGRTFQESLQKALR GLEVGVCGLDEKLDLKNPESMSVLKRELTVPGAERIWYVADAFRAGMTVEQIFGMNMIDPWFLVQIEDLIKEEEKVKTMGLSAIDRDLMFRLKRKGFSDM RLAKLLGVTEKSLRAHRHKLEIFPVYKRVDTCAAEFATDTAYLYSTYEEECEAAPSGRDKIMILGGGPNRIGQGIEFDYCCVHAALALRDDGYETIMVNC NPETVSTDYDTSDRLYFEPVTLEDVLEIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQMVQRLNLRQPPNATVRSEDEA IRAASKIGYPLVVRPSYVLGGRAMEIVYEEEELKRYLREAVQVSNDSPVLLDHFLNCAIEMDVDAVCDGKDVVIGAIMQHIEQAGVHSGDSACSLPPYSL PAHIQDEMREQVKKMALELGVVGLMNVQLALQGDDIYVIEVNPRASRTVPFVSKCIGVSLAMIAARVMAGKTLKEIGFTKEIIPNFYSVKEAVFPFAKFP GVDPILGPEMKSTGEVMGVGDTFGEAFAKAQMGASEVLPTGGTAFISVRDDDKPLVAGVARDLISLGFEVVATAGTAKLIEAAGLKVRRVNKVTEGRPHV VDMIKNDEVTLIINTTEGRQSIADSYSIRRNALQHKIYCTTTIAAGEAICEALKFGPEKTVRRLQDLHAGLKA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site