Strain | Pseudomonas sp. URHB0015 N526DRAFT_scaffold00013.13_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTTGTCGCGCTGCTCGGCTGGATCCTCTGCAGTGCCGTGCAAGCCCTGCGGCCGTTGCAGCTGTGGGCGGCGCCGGTGTTGGGCAGTTGGTTGTTCGTCG CACTGGTGCCAGCGGGTCTGCCCAATTCCGTGGTCTACAACAAGACCCCGGACCAGTTCATCGTCGATCACGTTGCCGAACTCAGCCAAAGCACCCATCT GCTGAGCAATGACCTCGGGGCTGCGTCCGCCCTGGCCTGGCGCCTCAAGCGCCCGGACGTGGAACTCTACAACACCGTCGGCGAAGTGAAATATGGCCTG GCGTATCCTGACACCCTGCATCGTCGGGTCGACTTCCTCAAAGTCGGCCAATGGATGGCCGATGCACGCAAGGAAGGCCAAGTCGGCGTGGTAATGCGCA TCAACGGCGAGGAACACTATGAAATCGACCAGTTGCCCCAGGACTTCAAGCGGTACGACCAGGGCAACCTGGTGATCCTGATCTTCGCCAAGAGTCAGCC
|
|
DNA Sequence for Gene |
>N526_RS0115980
ATGAGCCTGCTGTGGATACTCCTCGCCTGTCTGCTGACCTGCCTCGGCCAAGTGGCCCAGAAGTACGCGGTGGAAAGCTGGCGCGACCAGCCCTCCACCC TGCTGGCCAAATTGCGCTCGCCGTGGCTGTGGCTGGCCCTGGCGAGCCTGGGCCTGGGCCTGCTGGTGTGGTTGCTGGTGCTGCAACGCCTGGACGTCGG CGTCGCCTACCCGATGCTCAGCCTGAACTTTGTGCTGATTACCCTGATCGCGCGGTTTGTCTTTCACGAAAGCGTTGATCGCCGGCACTGGATCGGCGTC GCCGTGGTCATTGCCGGCGCAGCGCTGCTGGGAGGCCAGCTATGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCAGGCGCGGTATCGGCTTTGCCCTGGGCAGCGTGCTGTTGGTCAGCAGCGCCCAGTTGGGCATGCGCTGGAGCATGAGCCATTTGCCGCTGCCGACCCA GTGGCTGGCAGTCCTGGAATCCGGCGCGGTCGACCTGCTGGCGGTTGGCGTGGTGCTGGCCTCGATCCTGGCCTATGCGCTGTCGATGCTCTGCTGGCTG CTGGCCCTGCGCGACTTGCCGCTGGGACGTGCCTACTCGCTGCTGAGCATCAGCTACGCCCTGGTCTACCTGCTGGCCGCCAGCCTGCCGCTGTTCAACG AACCCTTCAGCCTGTCCCGGACCCTGGGAGTGGCTTTGGTCATTCTTGGGGTTGTCATCATCAATTCTCGCGGCAATCGCCCTTCAGACGTCAGGAACGC CTCATGAAAATCAGTGTAATCGGCAGTGGCTACGTGGGCCTGGTGCAGGCAGCTGTGCTGGCCGAAGTCGGCCATGACGTGGTGTGCATGGACATTGACG
|
|
Amino Acid Sequence |
>4-amino-4-deoxy-L-arabinose-phospho-UDP flippase
MSLLWILLACLLTCLGQVAQKYAVESWRDQPSTLLAKLRSPWLWLALASLGLGLLVWLLVLQRLDVGVAYPMLSLNFVLITLIARFVFHESVDRRHWIGV AVVIAGAALLGGQL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|