Pseudomonas sp. URHB0015, N526_RS0115860
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:cd06261
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:cd06261
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF161098 | MetI-like | IPR035906 | MetI-like superfamily | 68 | 255 | 2.35E-21 |
| PANTHER | PTHR43386 | OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN APPC | - | - | 14 | 265 | 3.7E-58 |
| CDD | cd06261 | TM_PBP2 | IPR000515 | ABC transporter type 1, transmembrane domain MetI-like | 73 | 254 | 9.50703E-11 |
| Pfam | PF00528 | Binding-protein-dependent transport system inner membrane component | IPR000515 | ABC transporter type 1, transmembrane domain MetI-like | 92 | 265 | 4.2E-28 |
| Gene3D | G3DSA:1.10.3720.10 | - | IPR035906 | MetI-like superfamily | 62 | 269 | 1.7E-18 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.