Pseudomonas sp. URHB0015, N526_RS0114545

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URHB0015 N526DRAFT_scaffold00011.11_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
AGCTTCCGCCGATCGCGTCATCGAACTGATCGAACAACAGCGCGCCAGCGGAATAGACGCTTCGCGGATTTTCCTCACGGGCTTTTCCCAGGGCGGCGCC GTGGTCCTGCACACGGCATTTCTTAAATGGCAGGGAGCATTGGGCGGTGTCCTGGCCCTCTCCACCTATGCCCCGACTTTCAGCGAGACACTCGAACTGT CGGCCAGCCAGCAGCGGATTCCGGTGCTGTGCCTGCACGGCCAGTACGACGACGTGGTGCAGAACTCGATGGGCCGTAGCGCCTACGAGCACCTGAAGAA CCGTGGTGTCACCGTGACATGGCAGGAATACCCAATGGGGCACGAAGTGTTACCCGAGGAAATTCGCGACATTGGCACCTGGCTTGCCGACCGTTTGCGC TGATACCGGCACATCTGTGTCGCCGTATGACCAACGTACTACGCCGCGCCCGTTTCTTGCATTACACTGGCCGGCGTACATTCCTTAACCAATTAATGAG
DNA Sequence for Gene
>N526_RS0114545
ATGACCGTGCTCAAAGCACTCAAGAAAATGTTCGGTAAAAGCGAGGCTGAGCAGCTCGCGCCCAGCTCCAGCGCCCCCACTCCTGCTACCAGCCACCGCA CCGACGGTCATCAGCCTGGTCTAACCGCAGCGGGCAGCGCAGCGAAAATCGAGCCGGTGAACACACCTGCCATCGAAACGCCCCCGGGCCCCGTACGCAG CGAAACGCCGAAACCGCGTCGCCCCCGTGCACCAAAACCGCCGGTAGTGACCTGGAAACTCGAAGACTTCGTGGTCGAACCCCAGGAAGGCAAAACCCGC TTTCACGACTTCAAGCTGGCCCCGGAATTGATGCATGCCATCCAGGACCTGGGCTTCCCGTACTGCACGCCAATCCAGGCGCAAGTACTGGGCTTCACCC TGGCCGGCAAGGACGCCATCGGTCGCGCCCAGACCGGCACCGGCAAAACCGCCGCGTTCCTGGTGTCGATCATCACCCAACTGCTGCAAACCCCGCCGCC GAAAGAGCGCTACATGGGCGAGCCACGGGCGCTGATCATCGCGCCGACCCGCGAGCTGGTGGTGCAGATCGCCAAAGACGCAGCCGACCTGACCAAGTAC ACCGGCCTCAACGTCATGACCTTCGTTGGCGGCATGGATTTCGACAAGCAGCTCAAGCACCTTGAAGCCCGCCATTGCGACATCCTCGTCGCCACGCCGG GCCGCCTGCTGGACTTCAACCAGCGCGGCGACGTGCACCTGGACATGGTCGAAGTGATGGTGTTGGACGAAGCCGACCGGATGCTCGACATGGGTTTCAT CCCACAAGTGCGTCAGATCATTCGCCAGACTCCGCCGAAAAGCGAACGCCAGACCCTGCTGTTCTCCGCCACCTTCACCGAAGACGTGATGAACCTGGCG AAGCAGTGGACCACCGATCCGGCCATCGTCGAAATCGAAGTGGCCAACGTCGCCAACGAAAACGTCGAGCAGCACATCTACGCGGTGGCCGGCGCCGACA AATACAAACTGCTCTACAACCTGGTCAACGACAACGGTTGGGAGCGGGTCATCGTGTTTGCCAACCGCAAAGACGAAGTACGCCGCATCGAAGAACGCCT GGTGCGCGACGGCATCAATGCGGCGCAGTTGTCTGGCGACGTGCCACAGCACAAGCGCATCAAGACCCTCGAAGGTTTCCGCGAAGGCAAGATCCGCGTG CTGGTGGCCACCGATGTGGCCGGCCGCGGCATTCACATCGACGGCATCAGCCACGTGATTAACTTCACCCTGCCGGAAGTGCCGGACGACTACGTGCACC GTATTGGCCGTACCGGTCGCGCAGGCGCTGACGGTGTGTCCATCAGCTTCGCCGGTGAAGACGACTCCTACCAGCTACCGTCTATCGAAGAGCTGCTGGG CCGCAAGATCAGTTGCGAAACCCCGCCAACCCATCTGCTGCGGCCTGTAGAGCGTAAACGCCCGTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GATAGGGTCACGATTAAAGAAGCGCACCCGGCCACGGACTGCGCTTTTTTTACGCCCGGATATTGCCAAATAGATGAATAAGTCCACAATGGACAAATTA GTTTAGTTGCGACTTCATGGAGTCCCTGCATGTCCAGCACCCCTTTAGTGATCGCCCAAGCCCAGGCCCGCGAACTGCTCGCCCGGGTCGACGTACCGCA GATCCTGCGCAAGCTGTTTCGACACCTGGCGGCTGGCCAAGCCGTGCAACCGGCCCAGCAACTGGTGGAGTTCCCCCAGGGTGCCGGCGACTTCATCAAC TACTTGGGAGTGCTGGCCGAGGACGGCGTGTACGGAATCAAGACCTCGCCTTACATCGTCCGCGAGCAGGGCCCGCTGGTCAGTGCCTGGACCTTGCTGA TGTCGATGCACACCGGCCAGCCCCTGCTGCTGTGCGATGCCGGCGAACTGACCACCGCGCGCACGGCGGCGACAACGGCGGTGGCGGTCGATGCACTGGC
Amino Acid Sequence
>ATP-dependent RNA helicase RhlB
MTVLKALKKMFGKSEAEQLAPSSSAPTPATSHRTDGHQPGLTAAGSAAKIEPVNTPAIETPPGPVRSETPKPRRPRAPKPPVVTWKLEDFVVEPQEGKTR FHDFKLAPELMHAIQDLGFPYCTPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLVSIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDAADLTKY TGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLLDFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTEDVMNLA KQWTTDPAIVEIEVANVANENVEQHIYAVAGADKYKLLYNLVNDNGWERVIVFANRKDEVRRIEERLVRDGINAAQLSGDVPQHKRIKTLEGFREGKIRV LVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGADGVSISFAGEDDSYQLPSIEELLGRKISCETPPTHLLRPVERKRP
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site