Strain | Pseudomonas sp. URHB0015 N526DRAFT_scaffold00008.8_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CCAGTCAGGGTTGATCGCCGGAAAACGCCGCAGAAACTCGCCGAGCAACGGCACGATGTACAGGCGCCCGAACACCGTCCCCATGCTGACCTTGAGTGTG CCGGCCGGTCGCCCCTCGGCGCTGGCCAGGTTGGCCACCGCGTTCTGGATGGTGTGCAGGCTGGCGCTGACCTCACTCAAAAACAGCTGTCCGGCCTCGG TCAGTGTCAGGCTGCGGGTGCTGCGCTGGAACAGCCGCACACCGAGGCGCACCTCCAGTTTGGCGACACTCTTGCCCACCGCCGCCGGCGTCAGACTCAA GCGCCGCGCCGCCTCGGCGAAGCTGCCGACTTCGGCGCTGCGGACGAAGCATTCGATACTGCTGAAGGTTTCCATGGCCGCCACTACCAACTTCTGGTTT ACACAGACTATCGCAATTACCGTCTACACAGCAGGTAATCGGAAATCGATACTAGGCCCCATCAACCGCGGCATCTCGCCTCGGGACTTTGGAGATCAAC
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DNA Sequence for Gene |
>N526_RS0111455
ATGACCACTCACACCCTCAGCGGCAAAGTAGCGCTGATCCAGGGCGGCTCCCGCGGCATCGGTGCAGCCATCGTCCAACGCCTGGCCGCTGAAGGCGCCG CCGTGGCCTTCACCTATGTCAGCTCCGCCGCCAAGGCCGAAGCACTGCGTGACAGCATCACCGCCAATGGTGGCAAGGCCCTGGCGATCAAGGCCGACAG CGCCGACGCAGAGGCCATCCGCAGCGCGGTCAACGCCACGGTGCAGACTTTTGGCCAGTTGGACATTCTGGTCAACAACGCCGGCGTACTGGCAGTCGCA CCGCTGGAAGACTTCAAACTGGAAGACTTCGACCAGACTCTGGCGATCAATGTGCGCAGCGTGTTCATCGCCACCCAGGAAGCCGCCCGGCACATGACTG AAGGCGGTCGCATCATCAACATCGGCAGCACCAACGCCGACCGCATGCCCTTCGCCGGTGGCGGCCCCTATGCCATGAGCAAGGCGGCGCTGGTCGGCCT GACCAAGGGCCTGGCGCGCGACCTTGGTCCACGGGGCATCACCATCAATAATGTGCAACCCGGCCCGGTCGACACCGACATGAACCCGGCCCACGGTGAC TTTGCCGAGAGTCTGATCCCGCTGATGGCTGTGGGTCGCTACGGCACTGCCGAGGAAATAGCCAGCTTTGTCGCCTACCTGGTGGGCCCGCAAGCGGGTT ACATCACCGGCGCGAGCCTGACCATCGATGGTGGTTTCGGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCCAGACCAGCAAAACCAACGCCGGGAAACCCTGATCAGGTTACCCGGCGTTTTGTTCAGACCGCCTCGAACACCGGCAAGCCATAGGCCTGCAGCGGG AAGGCATCGAGACTGCGCAGAATGCGATCGGCATGAGCATACTTTTCATCGGCCATGGCCGCGTCCGGCACCGCAATGGCGGTCATGCCTGCCGCCTTGG CCGCGGTCACGCCGAACGGCGAATCCTCGAACACCAGGCAATCGGCGGGCGCCACGCCCAGGCGTCGCGCGGCGGTGAGGAAGATATCCGGTGCCGGCTT GGCCGCGCCCACCTCAGGGTCATCCGCTGTGACAATGGTGTCGAACAGGGCAAACCAATCACCATGCCGGGTAGCTTTCTGGGCGAATGAACCGCTCGAG GAACTGGTGCCAATGGCGATCGGAATCCGCCAGGCCTTCAAGTGCTCAACCAACTCGCGCGCGCCCGGCATTGCCGGGGCGTGGGGGAATCGCTCCTGCA
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Amino Acid Sequence |
>oxidoreductase
MTTHTLSGKVALIQGGSRGIGAAIVQRLAAEGAAVAFTYVSSAAKAEALRDSITANGGKALAIKADSADAEAIRSAVNATVQTFGQLDILVNNAGVLAVA PLEDFKLEDFDQTLAINVRSVFIATQEAARHMTEGGRIINIGSTNADRMPFAGGGPYAMSKAALVGLTKGLARDLGPRGITINNVQPGPVDTDMNPAHGD FAESLIPLMAVGRYGTAEEIASFVAYLVGPQAGYITGASLTIDGGFGA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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